Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1369 ATGGCTTCCCAACAACCTCTTCTAGACAAGCCCAGAAAATCCCTTTCCAAGACTCTCTGGTTAATCCTCGCTCTTGTTGCTGTTGTAAGCTCCTCAGCCCTTGTTGCTTCTTACCTCACCAAACCCACCTCCTTCGTCAACCTCTCCTCGTCCCACAATGTCTGTAAACATGCCGTTGACAAAGCATCATGCTTAACCCATGTCTCAGAAGTAGCTCAAGGCCCCATCTTGGCCGCCATCACTGAACACCAAAAGTTCAGTTTGCTTCAATCCTTCCTAATGAAGTCAACCTCACACATTCAGAAAGCCAAGGACACAGCCAAAGCTGCCAAACTCCGCCTTAACAGTCCCAAGGAGGAAGCTGCTTTGCATGTCTGTGAAGAGCTCCTGGACTTGTCCAAGGACAGAGCCATTGACTCAGTCTTAGCTCTAACAAACAGAACCTCTCTTTCGCTGCAAGATGCACACACGTGGCTGAGCAGCGTGCTCACTAACCATGCAACTTGCTTGGATGAATTAGAGGGGTCTGCTCGTGCCCTTCTGGAGCCTGAACTCGAGGACTTGATATCAAGGGCAAGAACCTCTCTGGCCATGCTTGTTGCAGTGTTGCCTCGAAAGAGCAGTGAGCAACTCATTGACGAGCCACTGAAGAGGAACTTTCCCTCATGGGTGACACGCAGCGATCGGAGGCTGTTGGAGGCTAAGGCGTCAGATATAAAGGCGAATGCCGTGGTGGCTAAGGATGGGAGTGGCAAGTTCAAGACTGTGGCAGAGGCTGTTGCATCCGCACCCGACAATAGTAAGACAAGGTATGTTATATATGTGAAGAAGGGAACGTACAAGGAGAATGTTGAAATTGGTAGTAAGAAGAAGAACGTGATGCTGGTGGGTGATGGTATGGATGCAACAATAATCACAGGCAGCTTGAACGTTGTAGATGGAACTGGCACCTTCCAGACTGCCACCGTTGCTGCCGTAGGTGATGGATTTATAGGGCAAGACATATGGTTCCAGAACACAGCAGGCCCAGAGAAGCACCAGGCCGTGGCGCTGCGCGTGGGTTCAGACCAATCCGTGATAAACAGGTGCCGCATTGACGCCTACCAGGACACTCTTTATGCCCATTCTAACAGGCAGTTCTACCGTGACTGCTACATCACCGGCACCATTGACTTCATCTTTGGAAATGCAGCTGTTGTCTTCCAAAAGTGCAACCTGGTGGCCCGAAAGCCCATGAGTAAGCAGAAACATGGTCACCGCACAAGGACGAGAGGACCCAAACCAGAACACCGGGACTTCCATTCAACAGTGTCAAATAACGCCAAGCTCTGA 1332 0.5045 MASQQPLLDKPRKSLSKTLWLILALVAVVSSSALVASYLTKPTSFVNLSSSHNVCKHAVDKASCLTHVSEVAQGPILAAITEHQKFSLLQSFLMKSTSHIQKAKDTAKAAKLRLNSPKEEAALHVCEELLDLSKDRAIDSVLALTNRTSLSLQDAHTWLSSVLTNHATCLDELEGSARALLEPELEDLISRARTSLAMLVAVLPRKSSEQLIDEPLKRNFPSWVTRSDRRLLEAKASDIKANAVVAKDGSGKFKTVAEAVASAPDNSKTRYVIYVKKGTYKENVEIGSKKKNVMLVGDGMDATIITGSLNVVDGTGTFQTATVAAVGDGFIGQDIWFQNTAGPEKHQAVALRVGSDQSVINRCRIDAYQDTLYAHSNRQFYRDCYITGTIDFIFGNAAVVFQKCNLVARKPMSKQKHGHRTRTRGPKPEHRDFHSTVSNNAKL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1369 443 ProSitePatterns Pectinesterase signature 1. 267 286 IPR018040 -
Dod02g1369 443 SUPERFAMILY Pectin lyase-like 240 417 IPR011050 -
Dod02g1369 443 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 176 IPR035513 -
Dod02g1369 443 PANTHER PECTINESTERASE 19 417 - -
Dod02g1369 443 MobiDBLite consensus disorder prediction 411 443 - -
Dod02g1369 443 ProSitePatterns Pectinesterase signature 2. 386 395 IPR033131 -
Dod02g1369 443 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 199 IPR035513 -
Dod02g1369 443 SMART PMEI_2 46 198 IPR006501 GO:0004857
Dod02g1369 443 Pfam Pectinesterase 242 417 IPR000070 GO:0030599|GO:0042545
Dod02g1369 443 Gene3D - 200 440 IPR012334 -
Dod02g1369 443 CDD PMEI-like_4 55 202 - -
Dod02g1369 443 TIGRFAM PME_inhib: pectinesterase inhibitor domain 23 177 IPR006501 GO:0004857
Dod02g1369 443 PANTHER PECTINESTERASE 19 417 - -
Dod02g1369 443 Pfam Plant invertase/pectin methylesterase inhibitor 52 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1369 Dod-Chr2 16483635 16486901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1369 3 417 Carbohydrate Esterase AT1G11580 52.706 1.35e-151 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1369 K01051 - gmx:100815836 610.142