Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1368 ATGGGTACCCATCAACCACTCCTAGACAAGCCAAGAAAATCCCTTTCCAACAAGACTCTCTGGTTAATCCTCGCACTTGTTGCTGTTGTGAGCTCCTCAGCCCTTATTGCTTCTTACCTCACCAAACCCACCTCCTTCTTCAACCTCTCCTCGTCCCACAACGTATGTGAACATGCCCTTGACAAAGCATCATGCTTAACCCATGTTTCAGAAGTAGCTCAAGGCCCCATCTTGGCCACCACCACAAAACACAAGCTCACTTTGCTCCACTCTGTTCTAACGAAGTCTACCTCACACATTCAAAATGCTATGGACACAGCCAGAGCTGTCAAACTCCGGCTTAACAGTCCCAAGGAGGAAGCAGCTTTGCAGGTGTGTGAGGAGCTCTTGGACTTGTCCAAGGACAGAGTATTTGACTCAATGGTGGCTCTAGCAAAAAGAACCTCTCTTTCGCTGCAAGATGCACACGCGTGGCTGAGCAGCGTCCTCACTAACCATGCCACTTGCTTGGATGGATTAGAGGGTTCTTCTGCTCGTGCCATTTTGGAGGCTGAACTCGAGGACTTGAAATCGAGGGCAAGAACCTCTCTGGCCATGCTTGTTGCAGTGTTGCCTCAAAAGAGCAGTGAGCAAGTCATCGAGGAGCCACTGAATGGGGACTTCCCCTCGTGGGTGACACGCAAGGATCGGAGGCTGTTGGAATCAAAGGCTGGTGATATAAACGCGAATGTTGTGGTGGCTACAGATGGGAGTGGCAAGTTCAAGACGGTGGCGGAGGCTGTGGCATCCGCACCTGACAACAGTAAGACGAGGTACGTTATATATGTGAAGAAGGGAACGTACAAGGAGAATGTCCAAATTGCTAGTAAGAAGAAGAACGTGATGCTTGTGGGTGATGGTATGGATGCAACAGTCATCACCGGTAGCTTGAACGTTGTCGATGGAAATACCACCTTCCAGTCTGCCACTGTTGGTAATGGATCTTTCTTCATTTTTTTCATCTGTATATCATTTGTGAATCTGACATCGAACACAATACTTCACTCATATTAA 1053 0.4834 MGTHQPLLDKPRKSLSNKTLWLILALVAVVSSSALIASYLTKPTSFFNLSSSHNVCEHALDKASCLTHVSEVAQGPILATTTKHKLTLLHSVLTKSTSHIQNAMDTARAVKLRLNSPKEEAALQVCEELLDLSKDRVFDSMVALAKRTSLSLQDAHAWLSSVLTNHATCLDGLEGSSARAILEAELEDLKSRARTSLAMLVAVLPQKSSEQVIEEPLNGDFPSWVTRKDRRLLESKAGDINANVVVATDGSGKFKTVAEAVASAPDNSKTRYVIYVKKGTYKENVQIASKKKNVMLVGDGMDATVITGSLNVVDGNTTFQSATVGNGSFFIFFICISFVNLTSNTILHSY* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1368 350 Pfam Pectinesterase 243 331 IPR000070 GO:0030599|GO:0042545
Dod02g1368 350 Gene3D - 237 345 IPR012334 -
Dod02g1368 350 CDD PMEI-like_4 64 203 - -
Dod02g1368 350 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 199 IPR035513 -
Dod02g1368 350 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 178 IPR006501 GO:0004857
Dod02g1368 350 PANTHER PECTINESTERASE 20 325 - -
Dod02g1368 350 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 203 IPR035513 -
Dod02g1368 350 PANTHER PECTINESTERASE 20 325 - -
Dod02g1368 350 Pfam Plant invertase/pectin methylesterase inhibitor 53 198 IPR006501 GO:0004857
Dod02g1368 350 ProSitePatterns Pectinesterase signature 1. 268 287 IPR018040 -
Dod02g1368 350 SUPERFAMILY Pectin lyase-like 241 328 IPR011050 -
Dod02g1368 350 SMART PMEI_2 47 199 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1368 Dod-Chr2 16465995 16476019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1368 3 331 Carbohydrate Esterase AT1G11580 46.903 6.68e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1368 K01051 - gmx:100815836 420.239