Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1364 ATGTTTGATTCTCACCATCACATGATGCTTGATATGCCATCCCACAAGACTTCTTCTGAGAGTGATTTGGGAAGGGCCAGAGATGATGAGTTGTACGACATCAAATCTGGCACTGAGACCATGGACGCTCCTTCCGGTGACGACCAAGACCCCAACCAACGACCCAGAAAGAAGGGTTACCACCGCCACACACAGCGCCAGATACAAGAAATGGAAGCCTTCTTCAAGCAGTGCCCTCACCCTGATGACAAGCAAAGAAAGGAGCTGAGCCGTGAGCTGGGATTAGAGCCCCTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGCACCCAGATGAAGGCTCATCATGAACGCCATGAGAATGCTGTTTTAAAGGCTGAGAATGAGAAGCTTCGCGCGGAGAACAGTAGATACAAGGAGGCCCTTAGTAATGCTACATGCCCCAACTGTGGAGGCCCTGCTGCTCTTGGTGAAATGTCCTTTGACGAGCAGCATTTGAGGATTGAGAATGCTCGGCTAAAAGAAGAGATTGATAGGATTTCAGGAATAGCGGCCAAATATGTTGGAAAGCCCGTGACTTCCTATTCCAATCTTTCACCTCACAATAACAATCACATGTCTTCCCGCTCGGTTGATCTTGGAGTTGGTAGCTATGGAGCACAGTCAGCTGGAATGGTAGGAGAGATGTGTGGTGGCAGTGACCTTCTTAGGCCACTCCCACTTCCTGCTGATACTGACAAACCCATGATTGTGGAGCTTGCCGTTGCTGCAATGGAGGAGCTAGCGAGATTAGCTCCGGTTGGAGACCCTTTATGGGTCCCCAGCAACAACCTTAGTGAGATTCTAAACGAAGAGGAATACTTGAGGACTTTCCCTAGGGGTATAGGTCCGAAACCCTTGGGCTCAAGATCTGAAGCTTCAAGGGAATCCGTGGTGGTTATCATGAACCATACTAAACTCGTTGAGATCCTTATGGATGTGAATCAGTGGTCAACAACGTTTTGCGGTATTGTATCAAGAGCATTGACACTTGAGGTCCTCTCAACTGGAGTGGCAGGAAACTATAACGGAGCCTTGCAAGTGATGTCAGCTGAGTTCCAAGTCCCATCACCACTTGTTCCTACTCGTGAGAACTATTTCGTAAGGTACTGTAAGCAGCATCCAGATGGGACATGGGCAGTGGTTGATGTTTCCTTGGATAATCTGCGACCTGGTACATTCTCAAGAAGCCGAAGAAGGCCCTCTGGCTGTTTAATTCAAGAATTGCCAAATGGTTACTCCAAGGTGACATGGATTGAACATGTAGAAGTGGACGATAGAGCGGTTCATAATATATATAAACCGTTAGTTAATTCTGGCCTTGCTTTTGGAGCTAAGAGGTGGGTGGCTACACTAGATAGACAATGCGAACGTATTGCTAGTTCAATGGCCTGCAACATACCAGCAGGGGACCTTTGTGTGATAACCAGTTCTGAGGGAAGGAAAAGTATGCTGAAACTGGCAGAGAGAATGGTAATGAGCTTTTGTACTGGAGTTGGTGCTTCTACAGCACATGCTTGGACAACGCTATCCGCAACTGGATGCGATGATGTAAGGGTCATGACCAGGAAAAGCATGGATGACCCCGGCAGACCCCCTGGTATAGTGCTCTGTGCTGCAACCTCTTTTTGGCTTCCTGTTCCTCCCATGAGGGTCTTTGATTTTCTCCGAGATGAAAACTCAAGAAGTGAGTGGGATATTCTCTCCAACGGGGGTCTAGTTCAAGAAATGGCACACATAGCAAATGGTCGGGATCCTGGCAACTGCGTCTCTTTACTTCGTGTCAATAGTGCAAATTCCAGCCAAAGCAACATGCTGATCCTTCAAGAGAGTTGCACTGATTCCACTGGCTCATATGTAGTTTATGCTCCTGTGGATATTGTTGCCATGAATGTAGTTCTTAGTGGAGGGGATCCAGATTACGTTGCCCTGCTGCCCTCAGGCTTTGCTATTCTTCCTGATGGGCCTGGGCCAAACGGAGGCCCAATACTTGATGTTGGGTCCGGAGGAACTCTTCTGACAGTTGCATTCCAGATCTTAGTTGATTCAGTTCCAACGGCAAAACTATCTCTAGGTTCAGTGGCCACTGTCAACAGTTTAATTAAGTGCACAGTTGAAAGGATCAAAGCTGCAGTGATCTGTGACAGCACCTAA 2190 0.4767 MFDSHHHMMLDMPSHKTSSESDLGRARDDELYDIKSGTETMDAPSGDDQDPNQRPRKKGYHRHTQRQIQEMEAFFKQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAHHERHENAVLKAENEKLRAENSRYKEALSNATCPNCGGPAALGEMSFDEQHLRIENARLKEEIDRISGIAAKYVGKPVTSYSNLSPHNNNHMSSRSVDLGVGSYGAQSAGMVGEMCGGSDLLRPLPLPADTDKPMIVELAVAAMEELARLAPVGDPLWVPSNNLSEILNEEEYLRTFPRGIGPKPLGSRSEASRESVVVIMNHTKLVEILMDVNQWSTTFCGIVSRALTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKQHPDGTWAVVDVSLDNLRPGTFSRSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRAVHNIYKPLVNSGLAFGAKRWVATLDRQCERIASSMACNIPAGDLCVITSSEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSATGCDDVRVMTRKSMDDPGRPPGIVLCAATSFWLPVPPMRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDSTGSYVVYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGPGPNGGPILDVGSGGTLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVICDST* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1364 729 SUPERFAMILY Bet v1-like 491 721 - -
Dod02g1364 729 Pfam Homeodomain 57 112 IPR001356 GO:0003677
Dod02g1364 729 Pfam START domain 252 470 IPR002913 GO:0008289
Dod02g1364 729 SMART START_1 251 470 IPR002913 GO:0008289
Dod02g1364 729 SUPERFAMILY Bet v1-like 243 472 - -
Dod02g1364 729 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Dod02g1364 729 SMART HOX_1 56 118 IPR001356 GO:0003677
Dod02g1364 729 MobiDBLite consensus disorder prediction 1 65 - -
Dod02g1364 729 Gene3D - 306 474 IPR023393 -
Dod02g1364 729 CDD START_ArGLABRA2_like 246 469 - -
Dod02g1364 729 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
Dod02g1364 729 SUPERFAMILY Homeodomain-like 43 113 IPR009057 -
Dod02g1364 729 Gene3D - 44 130 - -
Dod02g1364 729 ProSiteProfiles START domain profile. 242 473 IPR002913 GO:0008289
Dod02g1364 729 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 19 726 - -
Dod02g1364 729 Coils Coil 108 143 - -
Dod02g1364 729 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 726 IPR042160 -
Dod02g1364 729 MobiDBLite consensus disorder prediction 1 36 - -
Dod02g1364 729 CDD homeodomain 57 115 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1364 Dod-Chr2 16430695 16436619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1364 1 727 Homeobox Transcription Factor Family AT4G21750 77.704 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod02g1364 START 5.3e-58 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1364 K09338 - qsu:112016283 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1364 02 16430695 16436619 Dod06g0576 06 6999344 7004750 PCT