Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1347 ATGGAGCTTCAAGGTCGCTCAGATCAGTGCCTCCCGGAGAGGAAAGGCCAGAAGAGGAAGCTTGAGGACGAATTCGACGACGAACAGCGCCAGATCTCCGCTCCCCCCACCGGCGACGCCCGCGACGCCCTCCTCTCCGACGTCAAGGACCAGGTCTCTATCCTCAACTCCACTTTCTCATGGAACGACTCCGATCGAGCCGCCGCCAAGCGGGCCACTCACGCGCTCGCCGATCTTGCCAAAAACGAGGAAGTGGTGAACGTGATTGTTGAAGGAAGGCGCAATTCCGGCTCTGGTTCAGCACCTCCAAGCGCCTCCTGTGGGAGAGGAAGACCTTGTTCAGAGGCCATTGCCGTTCGAGCACGAGGTCGAGAAAGGGAGTGCTTTCGCACTTGGTCTTCTTGCCGTCAAGGAATTATTGCAACTGAACTTATTCATGCCGTGGATTCTGCATGCTATGAGCCTGAACACCAACAGCTCATTGTTGACAATGGTGCCTTAAAACATCTTGTTGATCTTCTGAAGAGGCATAAGAATGGCTTGACATCACGTGCCATTAATAGTCTCATCCGTAGGGCAGCAGATGCAATCACTAATCTTGCTCACGAGAACAGCAGCATTAAAACTCGTGTCAGGAGGGAAGGTGGGATCCCACCACTTGTTCAGTTGCTTGAATTTGCTGATACAAAGGTGCAAAGAGCAGCTGCTGGTGCATTGCGAACCCTTGCTTTTAAAAACGATGAAAATAAAAATCAGATTGTTGAATGCTATGCTCTTCCAACTCTGATTCTAATGCTTCGTTCGGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTCCACTCCTCCCCCAATATCAAGAAAGAAGTTCTTCTTGCTGGAGCTTTACAGCCCGTTATTGGGTTACTTAGTTCCTGTTGCTCTGAAAGCCAGAGGGAAGCAGCCTTGTTACTTGGACAGTTTGCTGCAACTGATTCAGACTGCAAGGTTCATATCGTACAGAGAGGTGCCGTGGGACCTCTGATAGAGATGCTTCAGTCTCCTGATGTGCAGCTCCGAGAAATGTCTGCATTTGCATTGGGGAGATTGGCCCAGGACACACACAACCAAGCTGGTATTGCACACAATGGTGGCTTAGTCCCATTACTGAAGCTTCTTGACTCAAAAAATGGATCTTTGCAACATAATGCTGCTTTTGCACTTTATGGCCTTGCAGATAATGAGGATAATGTGTCAGATTTTATAAGGGTAGGTGGAATTCAGAAATTGCAGGATGGAGAGTTTATTGTTCAAGCAACTAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAAGAGAAGATAAATGGCCGTGTGCTGAACCATTTGTTATACCTTATGCGAGTTTCAGAAAAGGCTTTCCAAAGAAGAGTGGCTTTGGCTCTTGCTCATCTTTGTTTAGCAGATGATCAGAAAAAAATATTTATTGATCACCATGGATTGGAGTTGCTTATTGGGCTTCTTAGCTCGTCCAGCCCTAAGCAGCAACTTGAGGGTGCTGTGGCTTTGTTCAAGGTGGCCAACAAAGCTTCGACTCTGTCTCCGGTAGATGCTGCTCCCCCTTCTCCAACACCCCAGGTAGTTTATTTGGGAGAGCAATATGTAACAATGCTACCTTGCAAACGGTTTTATGCTCACAGAATCTGCCTGCTTGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTATAGGGAGAAGGATGCAAGGGACATAGAGATTCCGAATATTAGATGGGAGGTCTTTGAGCTGATGATGAGATTTATATATACCGGATCAGTTGATGTCACTCTTGATATTGCCCAAGATCTCCTCCGAGCAGCTGATCAGTATCTTTTAGAGGGACTTAAGAGACACTGTGAATACACAATTGCACAGGATATATCACTGGAGAATGTGTCAAGCATGTATGAACTTTCGGAAGCTTTTAATGCTATATCATTGAGGCACACATGCATCCTTTTTATATTGGAGCAATTTGATAAATTGAGTGCAAGGCCAGGACACTCTCATCTGATTCAGCGGATAACACCAGAGATCCGCAATTACTTTGTTAAAACTCTTACAAAGGGCAATTCCAACATCCAGCTGTAG 2151 0.4612 MELQGRSDQCLPERKGQKRKLEDEFDDEQRQISAPPTGDARDALLSDVKDQVSILNSTFSWNDSDRAAAKRATHALADLAKNEEVVNVIVEGRRNSGSGSAPPSASCGRGRPCSEAIAVRARGRERECFRTWSSCRQGIIATELIHAVDSACYEPEHQQLIVDNGALKHLVDLLKRHKNGLTSRAINSLIRRAADAITNLAHENSSIKTRVRREGGIPPLVQLLEFADTKVQRAAAGALRTLAFKNDENKNQIVECYALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVGPLIEMLQSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGIQKLQDGEFIVQATKDCVAKTLKRLEEKINGRVLNHLLYLMRVSEKAFQRRVALALAHLCLADDQKKIFIDHHGLELLIGLLSSSSPKQQLEGAVALFKVANKASTLSPVDAAPPSPTPQVVYLGEQYVTMLPCKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRHCEYTIAQDISLENVSSMYELSEAFNAISLRHTCILFILEQFDKLSARPGHSHLIQRITPEIRNYFVKTLTKGNSNIQL* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1347 716 MobiDBLite consensus disorder prediction 1 40 - -
Dod02g1347 716 MobiDBLite consensus disorder prediction 1 30 - -
Dod02g1347 716 Pfam Armadillo/beta-catenin-like repeat 330 369 IPR000225 GO:0005515
Dod02g1347 716 Pfam Armadillo/beta-catenin-like repeat 211 243 IPR000225 GO:0005515
Dod02g1347 716 Pfam Armadillo/beta-catenin-like repeat 246 285 IPR000225 GO:0005515
Dod02g1347 716 Gene3D - 313 436 IPR011989 -
Dod02g1347 716 Gene3D - 113 312 IPR011989 -
Dod02g1347 716 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 215 250 IPR000225 GO:0005515
Dod02g1347 716 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 165 215 IPR000225 GO:0005515
Dod02g1347 716 SMART arm_5 154 202 IPR000225 GO:0005515
Dod02g1347 716 SMART arm_5 330 370 IPR000225 GO:0005515
Dod02g1347 716 SMART arm_5 246 286 IPR000225 GO:0005515
Dod02g1347 716 SMART arm_5 486 526 IPR000225 GO:0005515
Dod02g1347 716 SMART arm_5 204 244 IPR000225 GO:0005515
Dod02g1347 716 SMART arm_5 371 411 IPR000225 GO:0005515
Dod02g1347 716 SMART arm_5 288 328 IPR000225 GO:0005515
Dod02g1347 716 SUPERFAMILY POZ domain 559 644 IPR011333 -
Dod02g1347 716 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 257 299 IPR000225 GO:0005515
Dod02g1347 716 ProSiteProfiles BTB domain profile. 550 617 IPR000210 GO:0005515
Dod02g1347 716 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 341 383 IPR000225 GO:0005515
Dod02g1347 716 Gene3D Potassium Channel Kv1.1; Chain A 549 685 IPR011333 -
Dod02g1347 716 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 8 712 IPR044282 -
Dod02g1347 716 Gene3D - 437 546 IPR011989 -
Dod02g1347 716 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 382 424 IPR000225 GO:0005515
Dod02g1347 716 SUPERFAMILY ARM repeat 189 526 IPR016024 -
Dod02g1347 716 Pfam BTB/POZ domain 559 645 IPR000210 GO:0005515
Dod02g1347 716 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 8 712 - -
Dod02g1347 716 SMART BTB_4 551 647 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1347 Dod-Chr2 16141841 16149024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1347 153 428 U-box Gene Family AT1G23030 27.758 1.11e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dod02g1347 BTB 1.1e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1347 - - gmx:100819832 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1347 02 16141841 16149024 Dod06g0598 06 7305901 7314194 PCT