Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1336 ATGGACTACAGCAGAATTGCATATTTGCACCCTATAAAACAACGACCCAGTTCGACCAAAACCCCTAGGTTGGATTTTGAGCTTCTGGTACTGTCCTGCCCCGTGCCTTTTGGTAGCTTCTGCTGCGGCTCCTTCTCTTTCCTCCTTCAACCCCATTGTGCTGCACAACCCAGTGTTAAATGCAGGATGGCAGAACATGCATATACTGTGGCATCTGACAGTGAAACCGCTGGAGAGGAAAAGACATATACTTTTCCTGAAATAGCAATTGGAATTGACATTGGCACATCCCAGTGCAGTGTTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTTTGAAGAACACCAGAAACCAGAAGATTATGAGATCATATGTAACCTTCAAAGATGACATCCCTTCTGGTGGAGTTAGCAGTCAACTTTCCCACGAGGGCGAGTTGTTGTCTGGAGCCACAATCTTCAACATGAAACGCTTGATTGGCAGAGTTGATACTGATCCAGTTGTCCATGCAAGTAAGAATCTCCCTTTTTTGGTGCAGACCTTGGACATCGGCGTTCGCCCATTTATTGCTGCATTAGTGAACAACATGTGGAGATCCACCACTCCAGAAGAAGTCCTGGCAATATTTCTGGTGGAATTAAGAGCACTGGCTGAAGCTCAGCTGAAAAGACCAATAAGAAATGTTGTTCTTACAGTTCCAGTTTCATTCAGTCGATTTCAGCTTACCCGCATAGAGCGTGCTTGTGCAATGGCTGGCCTTCATGTTCTCAGGCTGATGCCTGAACCAACAGCTGTGGCTTTGTTATATGCACAGCAACAACAGCAGGCTTCCCATGATAATTTGGGCAGTGGAAGTGAGAAAATTGCTCTCATTTTCAATATGGGTGCTGGTTATTGTGATGTCGCTGTGACTGCCACTGCTGGAGGAGTCTCTCAGATAAAAGCCTTGGCAGGAAGTACCATTGGTGGAGAAGACTTGCTTCAAAATATGATGCGTCATCTCTTACCAGATTCTGAAAATCTATTTAAGAGCCATGGGGTCAAGGCAATCGAAGCCATGGGATTGCTTCGAGTTGCGACTCAGGATGCAATTCACCAGCTTTCCTCTCAGACCAGTGTGCAGGTTGATGTGGACTTGGGAAATGGATTGAAGATATGCAAGGTTGTTGACCTGGAGGAGTTTGAGGAAGTAAACAGAGAGGTGTTTGAGAAGTGCGAGAGCCTTATTATCCAGTGTTTGCAAGATGCAAGGGTAGAAGTTGAGGATGTAAATGATGTGATAATTGTAGGAGGATGTTCTTATATCCCAAGGGTGAAGAGTCTCGTTACAAACACCTGTAGAGTTAAGGACGTTTATAAAGGTATGAACCCTTTGGAAGCTGCTGTCTGCGGTGCAGCAGTGGAAGGAGCTGTCGCCTCAGGAATCAATGATCCCTTTGGGAACTTGGACTTGTTAACCATTCAAGCCACACCACTGGCAATTGGGATCCGAGCTGACGGTAACAACCTTGTCCCTGTAATTCCAAGGAATACCACAATGCCTGCGCGCAAGGAGCTAGTCTTTACAACTATTCATGACAATCAAACTGAGGCCTTGATCCTTGTCTATGAAGGTGAGGGAACGAAGCCAGAAGAGAATCACTTGTTGGGATACTTCAAGATAATGGGAATACCGGCTGCACCCAAAGGAGTTCCAGAAATCAATGTGTGCATGGACATAGATGCTGCAAATGTGCTAAGAGTTTTAGCCGGTGTCGTGATGCCTGGATCTCGCCAGCCCGCAATTCCTGTTATGGAAGTGAGGATGCCAACAGTTGATGATGGGCATGGTTGGTGCGCTGAGGCCCTAACCAGAACCTATGGTGCTAAGTTGGATTTGGTTACTCTCCAGAACAAGGCATAA 1902 0.4627 MDYSRIAYLHPIKQRPSSTKTPRLDFELLVLSCPVPFGSFCCGSFSFLLQPHCAAQPSVKCRMAEHAYTVASDSETAGEEKTYTFPEIAIGIDIGTSQCSVAVWNGSQVELLKNTRNQKIMRSYVTFKDDIPSGGVSSQLSHEGELLSGATIFNMKRLIGRVDTDPVVHASKNLPFLVQTLDIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRALAEAQLKRPIRNVVLTVPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQASHDNLGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMRHLLPDSENLFKSHGVKAIEAMGLLRVATQDAIHQLSSQTSVQVDVDLGNGLKICKVVDLEEFEEVNREVFEKCESLIIQCLQDARVEVEDVNDVIIVGGCSYIPRVKSLVTNTCRVKDVYKGMNPLEAAVCGAAVEGAVASGINDPFGNLDLLTIQATPLAIGIRADGNNLVPVIPRNTTMPARKELVFTTIHDNQTEALILVYEGEGTKPEENHLLGYFKIMGIPAAPKGVPEINVCMDIDAANVLRVLAGVVMPGSRQPAIPVMEVRMPTVDDGHGWCAEALTRTYGAKLDLVTLQNKA* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1336 633 PRINTS 70kDa heat shock protein signature 564 580 - -
Dod02g1336 633 PRINTS 70kDa heat shock protein signature 423 439 - -
Dod02g1336 633 PRINTS 70kDa heat shock protein signature 483 502 - -
Dod02g1336 633 PRINTS 70kDa heat shock protein signature 455 475 - -
Dod02g1336 633 PRINTS 70kDa heat shock protein signature 228 248 - -
Dod02g1336 633 PRINTS 70kDa heat shock protein signature 88 101 - -
Dod02g1336 633 PRINTS 70kDa heat shock protein signature 116 128 - -
Dod02g1336 633 Gene3D Actin; Chain A, domain 4 323 404 - -
Dod02g1336 633 Gene3D - 90 470 - -
Dod02g1336 633 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 66 632 - -
Dod02g1336 633 Gene3D - 274 452 - -
Dod02g1336 633 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 480 595 IPR029047 -
Dod02g1336 633 CDD HSP70_NBD 90 470 - -
Dod02g1336 633 ProSitePatterns Heat shock hsp70 proteins family signature 3. 426 440 IPR018181 -
Dod02g1336 633 PANTHER HEAT SHOCK PROTEIN 70KDA 66 632 IPR013126 GO:0005524|GO:0140662
Dod02g1336 633 Gene3D - 153 208 - -
Dod02g1336 633 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 485 591 IPR029047 -
Dod02g1336 633 SUPERFAMILY Actin-like ATPase domain 88 271 IPR043129 -
Dod02g1336 633 Pfam Hsp70 protein 89 584 IPR013126 GO:0005524|GO:0140662
Dod02g1336 633 SUPERFAMILY Actin-like ATPase domain 285 471 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1336 Dod-Chr2 16023384 16027536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1336 89 583 Calmodulin-binding Proteins AT3G12580 37.945 1.45e-100 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1336 K09489 - gmx:100809773 1003.05