Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1296 ATGTTCTCTTCCACCTACACCTCCAATCCTTTCCAATCCTTCCCCTCATCATCATCATCATCTTCTTACCCTCCTCTTCAATTTTATATTGATCCTGAAAATGCTTTTGCTAGTGACACTAGCACCAACACCAATATCCTTCATGACCCATCATCACTAGGTGTTGTTCCCTTCCTGCCAAATACTCAAGCTCCAATCCCAGAACATGTAACCAATCTGATGGTTGCTGACTATGTTTCCTTGCTCCAAAGGGATAATGCCAATGGCAATGGTGCCGCCCAATATGGTGGTGGTGTCTCAAACTTCCTAACAAGGAAACCTGCAGCAAAGAAAGATAGGCACAGCAAGATTTTCACATCTCAGGGCTTGAGGGACCGCAGGGTGAGGCTGTCAAGCGAGATTGCCCGCAAGTTCTTTGATCTTCAGGACATGCTGGAGTATGACAAGCCCAGCAACACCCTTGAGTGGCTTTTCACGAAGTCTGATAATGCTATCAAAGAGCTTGCAAGGAGTAAGCATAGTTGCAGTGGGGATGCAAAGTGCTTCTGCTTCTCTCTTGAGCTACAAGGGGTAGGGGTAGATTCAAATGACAAAACTTTTGTGGGTGCTGGTGCTGCCAACAAGGAAAAGAAGATGAAGTGGGTGGAGAAGGAATTAGATGTTGGTGTTCAGGTTCAGGCAAAGAAGGAGTCAAGGGAGAAGGCAAGAGCTAGAGCAAGAGTAAGGAGTAGTTCCAAGATGTGCAGCACTACTGGTTCTTTGAGGGTCAAAGACATGGAGGAGAGAATCCCTGCAACTGCAGATCCTAGAATCCTCCACCAATTGATGCCACCAATTCATCCTCACACTCACCTAATGGTAATGGGCAGTAAAGCACCAAGAGATAATGGCTTTGAAGAAGCTATTAAAGAAGAATCTGGTGTATTAAAAAGGGATTTGAAGCCCTCTTTGATTGAGATCCCTGTGGGGACTAGTTTCAACAACAATGACTATGATCGCTACAACTCATGCCCCAATTCGCCTCAAAATTGGGATATCAATGAGGCCAATAGTGGTCGCTCCAGTTTTTGTGCAATTGCCAGCATGAATCTCTCTACAGGTATATGCTTCGTGAACAAATAA 1122 0.451 MFSSTYTSNPFQSFPSSSSSSSYPPLQFYIDPENAFASDTSTNTNILHDPSSLGVVPFLPNTQAPIPEHVTNLMVADYVSLLQRDNANGNGAAQYGGGVSNFLTRKPAAKKDRHSKIFTSQGLRDRRVRLSSEIARKFFDLQDMLEYDKPSNTLEWLFTKSDNAIKELARSKHSCSGDAKCFCFSLELQGVGVDSNDKTFVGAGAANKEKKMKWVEKELDVGVQVQAKKESREKARARARVRSSSKMCSTTGSLRVKDMEERIPATADPRILHQLMPPIHPHTHLMVMGSKAPRDNGFEEAIKEESGVLKRDLKPSLIEIPVGTSFNNNDYDRYNSCPNSPQNWDINEANSGRSSFCAIASMNLSTGICFVNK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1296 373 ProSiteProfiles R domain profile. 229 246 IPR017888 -
Dod02g1296 373 MobiDBLite consensus disorder prediction 1 22 - -
Dod02g1296 373 ProSiteProfiles TCP domain profile. 110 168 IPR017887 -
Dod02g1296 373 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 21 369 - -
Dod02g1296 373 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 369 IPR005333 GO:0003700
Dod02g1296 373 Pfam TCP family transcription factor 109 249 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1296 Dod-Chr2 15676476 15677597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1296 106 178 TCP Transcription Factor Family AT1G67260 63.014 1.14e-22 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod02g1296 TCP 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1296 - - aprc:113871835 268.085