Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1281 ATGAATAGCAGCAACAGTGTCAGTGGCGGTGGCGGTGGCGGTGATGGTGGTGGTGGGGCAGGGATGATGATGGGGATGATGGGTAGGTCTCCATTCACAGTGTCTCAGTGGCAGGAGCTGGAGCACCAAGCTCTGATTTACAAGTACATGGTGGCTGGTCTTCCTGTTCCTCCCGATCTTGTCATCCCCATTCAGAAGAGTTTTGACTCCATTTCCCAACCCTTCTTCCACCACCCTACTTTGAGTTATTGTTCCTTCTATGGGAAGAAGGTGGACCCGGAGCCTGGACGATGCAGGAGGACTGATGGGAAAAAGTGGAGGTGCTCCAAGGAAGCATACCCAGACTCCAAGTACTGTGAGCGACACATGCATCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGACACAGTCATCATCCACTGTGACATCACTGACTGCAGCTAGTGGTAGCAGTGGAACTGGAAACTATGAGAACCTTACGACAAATGCCTTTGGTAATCCCCAAGGTACTGGTTCTGGAACTGACCAAACCCACTATCAATTGGATTCCATTCCCTATGGGATTCCAAGTAGAGAATACAGGTATCTTCAAGGACTCAAATCTGAGGGTGGTGAACATAGTTTCTTTTCCAAAGCTATAGGAAGCAACAAGGATCTTCGGATGGAGTCGCAGCCGGAAAACACTGTGATGCCAGTTAGCGTTGCCTCGTTTTCTACATCAAGATCAAATAATAATTCCATGTTGCAGGGTGACTATCTCCAGCATTTGTATTTATCCAGTGAACATGCACTAGGAGAGTCCGTGAAGCATGAGGGTCAGTCTCTTCGACCTTTCTTCGATGAATGGCCTAGGAGCAGGGAGTCATGGTCTGGTCTGGAAGATGAGAGGTCCAGCCAGACAGCTTTCTCCACAACTCAACTCTCAATATCCATTCCTATGCCGTCATCCAACTTCTCTACAACTAGCTCTCAATCCTCACATGGTGAGATTTAA 1008 0.4841 MNSSNSVSGGGGGGDGGGGAGMMMGMMGRSPFTVSQWQELEHQALIYKYMVAGLPVPPDLVIPIQKSFDSISQPFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMTQSSSTVTSLTAASGSSGTGNYENLTTNAFGNPQGTGSGTDQTHYQLDSIPYGIPSREYRYLQGLKSEGGEHSFFSKAIGSNKDLRMESQPENTVMPVSVASFSTSRSNNNSMLQGDYLQHLYLSSEHALGESVKHEGQSLRPFFDEWPRSRESWSGLEDERSSQTAFSTTQLSISIPMPSSNFSTTSSQSSHGEI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1281 335 MobiDBLite consensus disorder prediction 133 184 - -
Dod02g1281 335 MobiDBLite consensus disorder prediction 294 335 - -
Dod02g1281 335 MobiDBLite consensus disorder prediction 124 184 - -
Dod02g1281 335 ProSiteProfiles QLQ domain profile. 31 66 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod02g1281 335 PANTHER GROWTH-REGULATING FACTOR 5 26 327 - -
Dod02g1281 335 PANTHER - 26 327 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dod02g1281 335 SMART QLQ_2 30 66 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod02g1281 335 Pfam QLQ 31 65 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod02g1281 335 MobiDBLite consensus disorder prediction 1 22 - -
Dod02g1281 335 MobiDBLite consensus disorder prediction 299 335 - -
Dod02g1281 335 ProSiteProfiles WRC domain profile. 92 136 IPR014977 -
Dod02g1281 335 Pfam WRC 93 135 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1281 Dod-Chr2 15574737 15579119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1281 27 135 GRF Transcription Factor Family AT3G13960 63.717 2.59e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dod02g1281 WRC 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1281 - - ahf:112749828 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1281 02 15574737 15579119 Dod02g1281 02 15574737 15579119 ECH