Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1276 ATGATTCAGAAAGCTGATATGAGACTTGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCATGCTCTCATGGGGTCAAAAGCCGAAGAATTTTCTGATGAAAACTGTCGCATAGGGGAGGCTAATAGTCAGTGTTCTGTGGATGAGGGCAATTTATCTTCTATTAGGAGCAGAGCTTGTGAAGGCTTGCAGCATACTGTCAGTGAAACCAGTCATATGCTTAGCGTTAATTCTAGTCATGATTCTCTGTCTGAAAATGCTGAGAGTAGACAGACCTTGTCAAATAAGTATCAGGATTCAAAGTATATAGAAGGTCATGATGACAACACTTCTTGTATTAGTAGGGCCAGTGATGTTGATGTAGAGAACAACAGCCATCAAAGGAATGCAGAAGGAATAAATATTTCTTGTAGCTCAGCTTCAGTTAGTCGTTTAGGGGCAGAAGGATCTGGGAGTGCTCCATCTGTTGATATATCTGGCTCGTCTGACATTCCATCCTCTAAAGATGCAGATACAGGCCATAGCTCACCTAGTGTACAAAACCTAATTGGACAATCTCAAAGAGGTAAATATCTCTCAGGTAGTCCGAGATTAATGCATCCAGAAGGGGATCCATGTTCTCATATCCCTGAAAAGTTGTCAGAATGCTCTTTTGAAAACACTAATTTATCATTGACCAAAGAGACGCCAACTATTGTTGTCTCTGGTGAGAAATCTATTGCTAATAAGGATAGCCTTATTGATGGTACTGCCAAGGTTTCACTGAAATTATGTCCAAAGTCAGAAGCAGATACTGATAATGTTGGTGATGCTAAAAATGATGGCCATAAATGTTCAGTCAAAGATGGACAGCATGAGAAGGCTGAGGAGCTGATTAAATCACCTACTAAGCAGGAACTTAAATCTGAAGATGAGAGTGATGAATCAGATGTTGTGGAACATGACGTAAAGGTGTGTGACATATGTGGAGATGCTGGTCGTGAGGATCTCCTAGCTATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTCAGAAGGTCCCTGAAGGTGACTGGTTATGTGAAGAATGCAAATATGAAAAGGAGACTGAAAATCAAAGGCTAGGTAAGAGTGAAGATGTATCAGATGTTGAGGAGAAAAAAGTTCTCAAAGTTGGTTCATCTTCACAAGTTTCTTGCGAACAACTTTCGGAAAACGTTGAAGTTGCTCCAGCAGCAAAAAGGCAAGCTCTTGAATCAATCACAGGATCGCCAAAGGGGTCAAGCCCCAAGAGATTAGTTCCACTGTCTCGTGAATCTTCATTTAAGAACTTAGATAAAGGAAAAGTGAAGCCTGGTCATGTGATGCCTATTCGTAATCCTTCTGGTGATGACAGAGAAATCGCTCGTTCTCCTTCCGTTGGTCCCCGAAGTCAAATTAAGGGTACGCTGTCGAAGTGTAATTCATTCAACACCTTAAATTCCAAGCCGAGAGTCAAACTTGTTGATGAAGTTCTTCCCCGACAACTGAAAGTGGGTGGTGAACAGACTTCTAAGAATATGGAGACGCCTGCCCGAATTACAGGGAAATCAACATTATTCAAATCCTCAAGTTTGGGTCGATCTAGTGCGAATGAACCAAAAGTTAAAATGCTCTCGCCCAAGTCTGTAACTTCTCAGGAATTGAAAGGATCAAGACATTTGAAAGAATCAAGTGCGTTTGACAGGAAGTTTCCATCTAGGATTGATCGGCCTGTGGTTGGTTCATCAATGGCTAGTTCTGTTGTTTCCACAGCTAAGGGTGATCAGAAACCTACATCTCGTGGTGAAACCACTAAATCTTCAGCAGTTAACAACAATAGAGAGTTGAAGGTTGACGAAGATGGAAAATTAAGTACATTACCGAAGTCGATAAGTAACGTAGGTCGGAAAGTTTTGGAATCTCAAGTTAGTTCAGAGAGAACATCAACCAGTGTTGATGAAGCCCTACAGGATGTCCTGCATCGATCGCGAGAGACAGCAAATCAGGTTGAGAAAACTAGAGGTAGTTCTGGGGATCGTGTGAAGCCAGTTGTCACTACTGTTTCAAAAAGCCCATTCTGTCCAAAATGTAAGGAAAATGGCCATGATCTGGAACAGTGCACAGCTGGTAGTACCCAGGAACCTGGAGCTGAAGTATCTGTAACTGCCTTAAGTAGTTCAAAAGAGGAGATGCATACGGGTAATAGATTGAAAGCTGCGATCCAGGCTGCTTTACTTAGAAGGCCTGAAATATACAAGAAGAAAGAAGTACCTAATCAAACTGATGAAGTTTCTACATCGAGCACAGACATGAATTGTGAAGTTAATTCACAAGACCAACTGATGGTTTCCAGCACACCAAAGAATAGTATATCTGCTGAAGAAACCCATGAACAGCAGGAAATCCTTGAGAATTCTACATCTGATTCTTCCAAATGCTCGTCTGCTAATGATTTGAAGCAACTCAACAATTGTCCAACTGATTTTTGTTCTCAACGAGGAAAGTCAGATTCCATTGGTCTTGACGCTGGAAAGCCTGTAGTAAGAGACTTGTCTAATAAAGCTTTGGCAATCCCAAGTGTTCTTTCGAAGATGTTGGTTATCCCAGAATACGAATACGTCTGGCAGGGTGTCTTTGAAGTGCATAGAATCGGAAAGCCTCCTGACCTTTGTGCTGGAGTCCAGGCACATTTATCCTCTTGTGCTTCCCCAAAGGTTCTTGATGCAATTAACAAGTTTCTACCCAAAGTTCCCCTGAATGAAGTTCCTCGTTTGAGCACATGGCCTTCACAATTTCATCAAGGTGGTGCAAGAGAAGATCATATTGCTCTTTACTTCTTTGCCAAAGACATTGAGAGTTATGAGAGACACTACAAGGATCAATTGGATCACATGATTCGAAATGATTTAGCACTTAAAGGAACTTTTGATGGTGTTGAACTTCTCATATTCCCGTCCAATCTGCTTCCTGAAAATTCACAGCGCTGGAATATGTTGTTTTTCTTATGGGGCGTATTTAGAGGGAGGAGGATCATTTCGTCAGATTCTACAAAAAATATTCGTATTCCCAGTTTGAATGCAATGCCGGTCGAAGAGGATTCTTCAACTGCTGTTGTGACTTTGTCTGAAATGCACAGTTCGCCAAAACACATGGGTGAAGAATCAATTGGCTGTGATAAAGTATGCAGTGCACTTGTCCCATCCACTTCTGTTGACCAAGATCAGATTACATCAAGTAGGAATATTAAGATCTCGGAGAAAGCTAATGTACTAGAACATGGACAGTGCAGAGAGTCTGAACCTCCTGAAGCAATGGGGACTAGTGGAAGTAGTAGGATTGTTGAAACAAAAACTGATTTTGACATTGCTGTCGAGCAAGAGAAAGCCTTGTCTCCAGGGGTTCCTTCTTTATGCAATCAAGAAAGAGGCACCACAAGCATTATTAGTAAGGATAAAGTGTCAGGGAGGGATAACAGCTATGAAGATCAGCAAAGGCGTAAGAGGAAACTGAAAGAAGATGATCACTATATTGACTTGGAGGCAACTGTTGTAAATCAAGAAACGTGTGCTGAGAGCACGACTATTACGGATAAAATTTCAGGGAAAATGAACAGTGATGAAGATCAGCAAAGGCCTAAGAGGAAACTGAAGGAAGATGATCACTATATTGACTTGGAGGAAACTGTTGTAAATCAAGAAACATGTGCTGAGAGCAATACTATTATGGATAAAATTTCAGGGAAAATGAACAGTGATGAAGATCAGCAAATGCCTAAGAGGAAACTGAAAGAAGATGAACTGTATATCGACTTGGAGGCAACTGTTGGAAATCAGGAAACAGGTACTAGTAATGATAAAATTCCTGAGAAAATGAACGGTGATGAAGATTGGGAAAGGCCTAAGAGGAGACAGAATGGTGATCACTATATTGACTTGGAGGCAGCTGTTGACAATGATGAAACAGGCGCTGCAAGCAATATTTGTAAGGATAAAGTTTTGGGGAGAATAGACAGTGATGAAGATAAATTATGGTCTAGGATGAAGCATAAATATGATCACTATATTGATTTGGGGGCAACTTTCCAGGGAGACATGGCTGTAGTTGGGGCTGATTGTCAGCTCCCAAATGATAAACAAGTTCAGTTTGTAGATCTTTCGGAGACAGTTATGCAGGCTTCTGCAGTTTGTAGTCAGAAACGACCTTGGAATGTCGTAAATGGCAAATTTGAGGATGGAGGAAGTTCTAGCAAGTCAGAGACAGGTTTCAGCGGGATTTACGGATGTTATGGTTCTGAAGGTAGGGACTCTCTTAATGTAGCTCGTGGTGAGAAGCTCATCGGTGAGGATTTGGGAACAATGGAAAGAACCTTCTTTCCTGTTGGTTCGCAGAACATCAGTGACTCACACTTGGTGCTCAACAGTATGTCGCTGAAAGGTCATCACGAGTATGAGAACCAATTCCAAGACGGAATTCCAAATCTAGAGCTTGCTTTAGGGGGTGAAAATAAACCGCCGCCGTCGCCACCGCCGCCCAAGGGCATGCTACCTTTCCTTGTTGGGGCAGTAGACAGGAAAAATAGCCAGGAAACCGGTCCGGACGGCTTGGCAGACGGGCAGGAGGATGATGCTGTTGCTGCATCTCTTTCCCTTTCTCTATCATTCCCATCTTCAAACAAGGAGCACAAAAAATCTGCTTCAAAAGCAGAGGTTTTACCTGATGGGCACCGTGTGAATACTCCGTTTCTCCTGTTTGGGAGATACACAGACAAATAA 4818 0.4209 MIQKADMRLESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRIGEANSQCSVDEGNLSSIRSRACEGLQHTVSETSHMLSVNSSHDSLSENAESRQTLSNKYQDSKYIEGHDDNTSCISRASDVDVENNSHQRNAEGINISCSSASVSRLGAEGSGSAPSVDISGSSDIPSSKDADTGHSSPSVQNLIGQSQRGKYLSGSPRLMHPEGDPCSHIPEKLSECSFENTNLSLTKETPTIVVSGEKSIANKDSLIDGTAKVSLKLCPKSEADTDNVGDAKNDGHKCSVKDGQHEKAEELIKSPTKQELKSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLQKVPEGDWLCEECKYEKETENQRLGKSEDVSDVEEKKVLKVGSSSQVSCEQLSENVEVAPAAKRQALESITGSPKGSSPKRLVPLSRESSFKNLDKGKVKPGHVMPIRNPSGDDREIARSPSVGPRSQIKGTLSKCNSFNTLNSKPRVKLVDEVLPRQLKVGGEQTSKNMETPARITGKSTLFKSSSLGRSSANEPKVKMLSPKSVTSQELKGSRHLKESSAFDRKFPSRIDRPVVGSSMASSVVSTAKGDQKPTSRGETTKSSAVNNNRELKVDEDGKLSTLPKSISNVGRKVLESQVSSERTSTSVDEALQDVLHRSRETANQVEKTRGSSGDRVKPVVTTVSKSPFCPKCKENGHDLEQCTAGSTQEPGAEVSVTALSSSKEEMHTGNRLKAAIQAALLRRPEIYKKKEVPNQTDEVSTSSTDMNCEVNSQDQLMVSSTPKNSISAEETHEQQEILENSTSDSSKCSSANDLKQLNNCPTDFCSQRGKSDSIGLDAGKPVVRDLSNKALAIPSVLSKMLVIPEYEYVWQGVFEVHRIGKPPDLCAGVQAHLSSCASPKVLDAINKFLPKVPLNEVPRLSTWPSQFHQGGAREDHIALYFFAKDIESYERHYKDQLDHMIRNDLALKGTFDGVELLIFPSNLLPENSQRWNMLFFLWGVFRGRRIISSDSTKNIRIPSLNAMPVEEDSSTAVVTLSEMHSSPKHMGEESIGCDKVCSALVPSTSVDQDQITSSRNIKISEKANVLEHGQCRESEPPEAMGTSGSSRIVETKTDFDIAVEQEKALSPGVPSLCNQERGTTSIISKDKVSGRDNSYEDQQRRKRKLKEDDHYIDLEATVVNQETCAESTTITDKISGKMNSDEDQQRPKRKLKEDDHYIDLEETVVNQETCAESNTIMDKISGKMNSDEDQQMPKRKLKEDELYIDLEATVGNQETGTSNDKIPEKMNGDEDWERPKRRQNGDHYIDLEAAVDNDETGAASNICKDKVLGRIDSDEDKLWSRMKHKYDHYIDLGATFQGDMAVVGADCQLPNDKQVQFVDLSETVMQASAVCSQKRPWNVVNGKFEDGGSSSKSETGFSGIYGCYGSEGRDSLNVARGEKLIGEDLGTMERTFFPVGSQNISDSHLVLNSMSLKGHHEYENQFQDGIPNLELALGGENKPPPSPPPPKGMLPFLVGAVDRKNSQETGPDGLADGQEDDAVAASLSLSLSFPSSNKEHKKSASKAEVLPDGHRVNTPFLLFGRYTDK* 1606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1276 1605 MobiDBLite consensus disorder prediction 1148 1185 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 793 832 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 1567 1587 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 152 200 - -
Dod02g1276 1605 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1246 1596 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 793 808 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 82 107 - -
Dod02g1276 1605 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 164 - -
Dod02g1276 1605 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 204 1102 - -
Dod02g1276 1605 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1100 1196 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 82 117 - -
Dod02g1276 1605 ProSiteProfiles Zinc finger PHD-type profile. 324 375 IPR019787 -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 598 627 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 1210 1232 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 1152 1168 - -
Dod02g1276 1605 PANTHER - 1246 1596 - -
Dod02g1276 1605 PANTHER - 204 1102 - -
Dod02g1276 1605 PANTHER - 1100 1196 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 1216 1232 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 1293 1321 - -
Dod02g1276 1605 SUPERFAMILY FYVE/PHD zinc finger 313 378 IPR011011 -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 152 214 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 452 488 - -
Dod02g1276 1605 SMART PHD_3 326 373 IPR001965 -
Dod02g1276 1605 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 261 387 IPR013083 -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 570 590 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 1169 1185 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 1303 1321 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 271 312 - -
Dod02g1276 1605 PANTHER - 7 164 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 271 317 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 543 630 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 1510 1529 - -
Dod02g1276 1605 MobiDBLite consensus disorder prediction 818 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1276 Dod-Chr2 15449491 15458480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1276 323 383 C2H2 Transcription Factor Family AT3G01460 34.426 3.99e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1276 - - adu:107488482 1961.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2621 03 57770167 57777902 Dod02g1276 02 15449491 15458480 ECH
Dod02g1276 02 15449491 15458480 Dod02g1276 02 15449491 15458480 ECH