Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1273 ATGCCAACAAAAATCATGGGAGGTGAAGAAGGTGCAGTTGGGGTGAGAGGTGTGAATGAAGGTGGTGGTGTTGGAGAGAATGAACAAGCTGAGAACAAGTGGCCACCGTGGCTGAAGCCACTTCTCCAAACAGGCTTCTTTGTTCAATGCAAAGTCCATGCTGATTCCCACAAAAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCCCTTTGCTCAGCTTGTCTGGCTTCTCACAAAGAGCATAGAGCTATTCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCTGAGATTCAGAAATTTCTGGACATAGCAGGGGTCCAGACCTACATTATAAACAGTGCAAAGATTGTGTTCCTGAATGAAAGGCCTCAGCCTAGGCCTGGCAAAGGGGTCACCAATACCTGCCAGGTCTGCGAGCGCAGCCTTCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATAGTTGGAACCTCCAAGAATTTCCAGAAGAAGAAACTGTTAGCTGAGACAACAGATGGGTCTGATGGTGAAGAATCGATGAATGGCATTAGCAATCGAACTGGCAGGAACAAAATCCTGAGCTTTACACCATCAACACCTCCACCAACAGTGGCCAATTACAGGACTGCTAAGAGGAGGAAGGGAATCCCACATCGAGCTCCATTTGGGGGAGGACTAATTATAGAATACTAA 714 0.4608 MPTKIMGGEEGAVGVRGVNEGGGVGENEQAENKWPPWLKPLLQTGFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHKEHRAIQIRRSSYHDVIRVSEIQKFLDIAGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKNFQKKKLLAETTDGSDGEESMNGISNRTGRNKILSFTPSTPPPTVANYRTAKRRKGIPHRAPFGGGLIIEY* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1273 237 MobiDBLite consensus disorder prediction 181 212 - -
Dod02g1273 237 Pfam PLATZ transcription factor 90 161 IPR006734 -
Dod02g1273 237 MobiDBLite consensus disorder prediction 178 212 - -
Dod02g1273 237 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 21 231 - -
Dod02g1273 237 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 21 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1273 Dod-Chr2 15435104 15437319 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dod02g1273 PLATZ 6.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1273 - - gmx:100792668 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2630 03 57850367 57853037 Dod02g1273 02 15435104 15437319 ECH
Dod02g1273 02 15435104 15437319 Dod02g1273 02 15435104 15437319 ECH