Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1255 ATGTTGTCAGTAGCACCACCTTCCGTTGACAGCAGTGCCAAACAGAAAACAGAACTCTCTTCTCCCAAAAATGCCGCAAATCCGACAGAACAAAAACAACAACCACCCTCTTCTCCACCCCAAACAACCCATATCTTCAAGTCAAAATTACCAGACATACCAATCTCCAACCACCTGCCACTCCACACCTACTGCTTCGAGCGCCTCTCCGAATTCTCCGACCGCCCCTGCCTCATCGTCGGCTCCGCGGCCAAAACTTACACCTACGCCGACACCTACCTCGCCTCCCAGAAAATCGCCGCCGGCCTGTCCAGCCTCGGAATCAAGAAAGGCGACGTCATCATGATCCTCCTCCAGAACTCCGCCGAGTTCGTCCTCTGCTTCATCGCCGCTTCCATGATCGGCGCCGTCGCCACCACCGCCAACCCGTTCTACACCGCCGCCGAGATCTTCAAGCAGATCGCAGCCTCCAAATCCAAGCTCGTCATCACCACGGCAATGTACGTGGACAAGCTCCGCGACGGCGGTGACAACACCACCAATAAGCTCAAACTCGGCGAGGATTTCAAGGTGATAACCGTCGACGACCCGCCGGAGAATTGCCTCCACTTCTCGGTGATCTCCGAAGGGAACGAGAACGACTTGCCGGAGGTTGAGATCCACCCTGACGACGCGGTTGCGCTGCCGTTCTCCTCCGGAACCACGGGGCTTCCGAAAGGAGTGCTTCTAACGCACAAGAGCTTAACAACGAGCGTGGCCCAGCAAGTGGACGGAGAAAACCCGAACCTGTATCTGACTCCTGAAGACGTTCTTCTCTGCGTGCTTCCTCTGTTCCACATATTCTCGCTGAACAGTGTGCTGTTGTGCGCGCTGAGAGCGGGGAGTGCGGTGTTGCTGATGCAGAAGTTCGAGATAGGGGCGTTGCTGGAGCTGATACAGAGGTACAAGGTGTCGGTTGCGATGGTGGTGCCGCCGCTGGTGCTGGCGCTGGCGAAGAACCCGATGGTGGCGGAGTTCGATTTGAGCTCTATAAGGTTGGTGCTGTCGGGGGCGGCGCCGCTGGGGAAGGAGCTGGAGGAGGCTCTCCGGAGCAGGGTGCCTCAGGCGGTTTTGGGACAGGGATACGGGATGACAGAGGCAGGACCGGTGCTGTCCATGTGCTTGGGCTTTGCCAAGCAGCCTTTCCCAACAAAGTCAGGCTCATGTGGCACTGTAGTAAGAAATGCAGAGCTCAAGGTTATTGACCCTGAAACTGGTTGCTCTCTTGGCTACAATAAACCTGGTGAAATTTGCATCCGGGGACAACAGATAATGAAAGGGTATTTGAATGATGATAATGCCACGGCAGCAACTATCGATGTAGAGGGTTGGCTGCATACCGGTGATGTTGGTTATATAGATGATGGTGATGAGATTTTCATCGTTGACAGGGTGAAGGAACTCATCAAATTTAAAGGGTTCCAAGTGCCTCCAGCAGAACTTGAAGGGCTTCTTGTAAGCCACCCCTCCATCGCAGATGCAGCAGTTGTTCCGCAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCATTTGTGGTGAGATCAAACGGCTTTGATCTCACTGAAGAGGCTGTAAAAGAGTTTATAGCTAAACAGGTGGTGTTTTACAAAAGACTTCACAAGGTTTACTTTGTTCATGCAATTCCAAAGTCTCCAGCAGGGAAGATATTAAGGAAAGACCTCAGAGCAAAGCTAGAAAACGCCACCCAGACGCCCAAATGA 1761 0.5338 MLSVAPPSVDSSAKQKTELSSPKNAANPTEQKQQPPSSPPQTTHIFKSKLPDIPISNHLPLHTYCFERLSEFSDRPCLIVGSAAKTYTYADTYLASQKIAAGLSSLGIKKGDVIMILLQNSAEFVLCFIAASMIGAVATTANPFYTAAEIFKQIAASKSKLVITTAMYVDKLRDGGDNTTNKLKLGEDFKVITVDDPPENCLHFSVISEGNENDLPEVEIHPDDAVALPFSSGTTGLPKGVLLTHKSLTTSVAQQVDGENPNLYLTPEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQKFEIGALLELIQRYKVSVAMVVPPLVLALAKNPMVAEFDLSSIRLVLSGAAPLGKELEEALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGCSLGYNKPGEICIRGQQIMKGYLNDDNATAATIDVEGWLHTGDVGYIDDGDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPAGKILRKDLRAKLENATQTPK* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1255 586 Pfam AMP-binding enzyme C-terminal domain 493 568 IPR025110 -
Dod02g1255 586 SUPERFAMILY Acetyl-CoA synthetase-like 53 580 - -
Dod02g1255 586 CDD 4CL 55 574 - -
Dod02g1255 586 Pfam AMP-binding enzyme 68 484 IPR000873 -
Dod02g1255 586 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 44 577 - -
Dod02g1255 586 PANTHER 4-COUMARATE--COA LIGASE 3 44 577 - -
Dod02g1255 586 Gene3D - 479 583 IPR045851 -
Dod02g1255 586 ProSitePatterns Putative AMP-binding domain signature. 228 239 IPR020845 -
Dod02g1255 586 Gene3D - 38 478 IPR042099 -
Dod02g1255 586 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1255 Dod-Chr2 15229778 15237088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1255 36 491 Monolignol Biosynthesis Gene Families AT1G65060 70.588 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1255 K01904 - gmx:547492 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1255 02 15229778 15237088 Dod02g1255 02 15229778 15237088 ECH