Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1254 ATGCAGATTGCCAGGGGGGACAGCATCATTGAAGAAGAAGAATCCAACATTGAAGCAAGAAGACAGGGCGGAGAAACAGTGAAGGTTGCTCAATCGCAACTTGTTGCGAGCCTCCACTTAACACAGAAACAGAGTAAATGCTACATGAAACAATTGTTATCAGGTCTTGAGCAATGTCACTCACGAGGTGTAATGCATGGAGACGTCAAGGGATCAAATCTTTTGGTGAATGATGAAGGGATATTGAAGGTGGCAGATTTTGGATTGGCGAATTTCTGCTATTCAGGGAACGAGCAACCCCTGACCAGCCGTGTTGTCACCTTGTGGTACCGCCCGCCTTAA 342 0.4649 MQIARGDSIIEEEESNIEARRQGGETVKVAQSQLVASLHLTQKQSKCYMKQLLSGLEQCHSRGVMHGDVKGSNLLVNDEGILKVADFGLANFCYSGNEQPLTSRVVTLWYRPP* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1254 113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Dod02g1254 113 PANTHER PROTEIN IMPAIRED IN BABA-INDUCED STERILITY 1 37 113 - -
Dod02g1254 113 SUPERFAMILY Protein kinase-like (PK-like) 39 113 IPR011009 -
Dod02g1254 113 PANTHER CELL DIVISION PROTEIN KINASE 37 113 - -
Dod02g1254 113 Pfam Protein kinase domain 36 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1254 113 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1254 113 Gene3D Transferase(Phosphotransferase) domain 1 38 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1254 Dod-Chr2 15220754 15224931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1254 38 113 Core Cell Cycle Gene Families AT5G64960 59.211 3.03e-25 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod02g1254 Pkinase 2.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1254 - - adu:107468284 135.961