Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1249 ATGGATCTTTTTGATGATTTTCTACCTGCCGCACCAACCGTCCGTGCTCGACCTGGTGGCAAGTTTGCTCCAAAGGCCAAATCCAAACAGCCACCTCGAAAAAAAACAGCTGTTTCAAATGATGATGCAGCAGGTGCTTCGGTTTCGAGTATGCCGGCTGAACAGTCTACCGGTTCCAAAAATAGTACACAGGTAGAACTTCATAATTTGGAGGAAAAGGGGTATCCTCAACAGGTTAGTGTAAAGGGAGATACTGCAGCCTCAGCGGATGCTTTACCGGAAACACCCGCATTGTCCGAATTTGAATCTGATCTGAATTTTACAAATCTTTCAAAATCAGCATGTGAAGCAGATCCTGTAGCATCTGAGGTGGGTCCCAATACTAACTCCATTCCTGAGACCAGCCTCAGAGGTAGTGTCGAAGAGCCACCTAAAAAGGGAAAAGGTTCATTGCTTGAGGGCAACATTCAATCGATTTCTAACCTTCGAAGTGAACAAGAGGCAGAGTCTGGGAAATTTGAATTAGATCCTTTCAGTGACGTCCTCCCTGATTCTGGCACTAAGACGGCTTGTAAGTTTCAACCCAAGATTAAGCCACGACCTAGAGTAGGCACTACACCAGCTATTGCTTCTGCTTCATTTGGAGGGTCTGTTGAGTTGCCCACATCCTGCACAAATGAAGTTCAATCCTTTCGGTGTAGTGGTGACGACAGTGGTGGACTAAATCGATCAACTGATTTGCCTATACCCACGCCTGATATTCCATTTGCTGAAGACAACAGTGACCTGGCAACAGGCATTCCTTCTCAACTGGATTCCCTCAATGCTATGCCTTCACAGAATGCAGAAATTTTCTCTGGGTTGGATTCCCTTGGTGACTTGCTCTCCCAAGCTGCCACAGACACAGGAAAACCAGCTCTTCAATCTTTCAATGAGAAGGGTAGAGAGGGAAAATTTTTCATTTCCGCTTGTGGTTCTATGAAATCTTCTGGGGTATGTGATACTTCCCAAGTTGAAATGTGTCCTGAGTATACCACCCAAGATTCATTAACCGTTGGTGAAGCTGCAATCCTGAATGAGGATGATACTCGTGCTAACAATAGAAGGTCGGAAACAGAGGAAGTTGCAGACTTGAGTCCTGGCTGCCCAGTTAATGACATCTTAGATTATCAGTCCCTGAAATCTGTCACAGATCCAACTTCTGAAATTCCTGTGCATGAAGAATTGACCAATGCTGCAGATAATCCCACATTGGCAGAACTTTTGCAGGCTGATGTTACCAGAGAAAAAGAAGATGCTAGTGGGAGAAAAAAGGATGGCATAAGGTTGAGTTCTCTTAGGAAACATAGAAGATCTTCTAGTGCTTGTGAGGATGAAAAAGGTGTTAAAACCTCAAGGCAGCTGAAAAAACAAGCATCTCGTAAACCTGTTAGCAACTCAGTGGAGGAGAATGATGATGAGGATCTTGACCCTCCCTATAATCCTACTAGAGATGAACTTGAAGAAAATGATGATGAATTTGATGTGGATTATTCATCCAAGAAGAAGACAACATTGAATTCAACAAAGAAACCTGTGGCTAAAAATGGAAAAACATCTAAAAAGAGTAAGAAGGATAATGAGGATGTAGAAGACGTCACTAAAGAACCTCCTAAAAAGTTCTCTCATTCAACCCGACGAAAAAAAAGATGCGTGAACAAGTCCCTGCTGGAAATTCCTGAGGATGAACTTGATCCGCAAACATTGCCTCTTAAGGATATTATTTTACTTGCAGAATACAGGGAGCGGTTGGCAAAAAAGGGGGCAACAACTTCAAAGACACCTTCAACAAATCAAAGTGGTGGAGATCCCTTTCATGAGGATGGTGCTAATATTGAAGAGGAGATCTTTGGTTCAGAAGATGGTAGAGAAACAGGTGATGATCAAGCCAGCGAAAGTATTCCATTGGCCCCCTCTTTGTTCAATTACCAGTCTTTCATGGACAAGGCACCTAGGGGAAAATGGTCAAAACAAGATACTGAACTGTTTTATGAGGCTGTTAGGCAGTTTGGCACAGACTTCTCTATGATACAACAACTATTTCCTGATCGAACACGACATCAAATTAAGTTGAAGTACAAGAAGGAAGAGCGACAACATCCTTTACAATTATCTGATGCTGTAAATAATCGTGCTAAAGATCATACTCATTTTAAGTTGGTGATTGAGCGACTGCAACAAGCTTCGACCAAGGCAGATCAAGACCCTGGTAGAGAAGCCTCAGATTTCATGACAGCGGAGGAGGTTGAGGACTTGGCACCTAGGACTAATGAGGATGTTGCAGCAACTGCGCAGGAAGCGGTTGCAGCGACTGCACAGGAAGCGGTTGCAGCGACTGAGCCGGAAGTGAATGTCAAAGATCAGGAAGATTCCATGGCAAATCATAGTCCAGACCAATCTGATGATAGTGATGACGACTTTCAAAGATGGGCTCAATATAAAAGTGAATATTAG 2493 0.4336 MDLFDDFLPAAPTVRARPGGKFAPKAKSKQPPRKKTAVSNDDAAGASVSSMPAEQSTGSKNSTQVELHNLEEKGYPQQVSVKGDTAASADALPETPALSEFESDLNFTNLSKSACEADPVASEVGPNTNSIPETSLRGSVEEPPKKGKGSLLEGNIQSISNLRSEQEAESGKFELDPFSDVLPDSGTKTACKFQPKIKPRPRVGTTPAIASASFGGSVELPTSCTNEVQSFRCSGDDSGGLNRSTDLPIPTPDIPFAEDNSDLATGIPSQLDSLNAMPSQNAEIFSGLDSLGDLLSQAATDTGKPALQSFNEKGREGKFFISACGSMKSSGVCDTSQVEMCPEYTTQDSLTVGEAAILNEDDTRANNRRSETEEVADLSPGCPVNDILDYQSLKSVTDPTSEIPVHEELTNAADNPTLAELLQADVTREKEDASGRKKDGIRLSSLRKHRRSSSACEDEKGVKTSRQLKKQASRKPVSNSVEENDDEDLDPPYNPTRDELEENDDEFDVDYSSKKKTTLNSTKKPVAKNGKTSKKSKKDNEDVEDVTKEPPKKFSHSTRRKKRCVNKSLLEIPEDELDPQTLPLKDIILLAEYRERLAKKGATTSKTPSTNQSGGDPFHEDGANIEEEIFGSEDGRETGDDQASESIPLAPSLFNYQSFMDKAPRGKWSKQDTELFYEAVRQFGTDFSMIQQLFPDRTRHQIKLKYKKEERQHPLQLSDAVNNRAKDHTHFKLVIERLQQASTKADQDPGREASDFMTAEEVEDLAPRTNEDVAATAQEAVAATAQEAVAATEPEVNVKDQEDSMANHSPDQSDDSDDDFQRWAQYKSEY* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1249 830 MobiDBLite consensus disorder prediction 450 466 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 407 574 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 599 625 - -
Dod02g1249 830 Gene3D - 668 732 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 424 441 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 763 830 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 42 65 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 602 617 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 796 830 - -
Dod02g1249 830 Pfam Myb DNA-binding like 658 741 IPR039467 -
Dod02g1249 830 ProSiteProfiles SANT domain profile. 667 711 IPR017884 -
Dod02g1249 830 PANTHER TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG 191 817 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 532 553 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 359 380 - -
Dod02g1249 830 SMART sant 664 712 IPR001005 -
Dod02g1249 830 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 660 716 IPR017930 -
Dod02g1249 830 MobiDBLite consensus disorder prediction 119 180 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 361 375 - -
Dod02g1249 830 MobiDBLite consensus disorder prediction 1 76 - -
Dod02g1249 830 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 191 817 - -
Dod02g1249 830 CDD SANT 667 708 IPR001005 -
Dod02g1249 830 SUPERFAMILY Homeodomain-like 666 714 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod02g1249 Myb_DNA-bind_7 1.9e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1249 K15198 - gmx:100792788 804.283