Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1248 ATGATGTTCTCCATCCATGGAACAACAACAACACCCTCCTCACCACTGACTTCCCCGACCCATTTCAGCTCCCTCCTCCTCTGCCGCCGGGCTCACCCTCCTCCTTCCTCCTCTCCGACTTCATCCGACGACTGGATCGACTCCCTCATCTTCCCCCCTTCTCCAACACCGCCACTGCCACCACCAGACAACTCCGACTACCCCACTCACACTCTCCTCCACACGCTCATCGACTGCGCGTGGCTCTCAGACACCGACCCTCACCGCGCCGCAGAGTGCCTAATCCATCTCATGAACTCAGCTTCTCATTCCGGCGACCCAACTCAGAGAGTCGCCTTCTACTTCATCGAAGCTCTCAGGACGAAGCTATCCCTATGGCCCCACGACAATAAAGACCCCACCTTTCCAATGATGGACACTACCCCAGAAGATTACTACACTCTCTCTTACAAGGCCTTCATCGAAGCTTGCCCTTATTCAAACTTCACTCACTTAACCGCAAACCAAGCCATTCTTGAAGCCACTGAAGCCGCCACAAACATTCACATCATTGATTTCGGTATTCTTCATGGGATTCAATGGCCCGCACTGTTGCAAGCTTTTGCGACTCGCTCTTCTGGGAAGCCTCACAGTATCAAAATCTCTGGGGTGCCTTCTATGTCTCATAAAGCTTCTTCTTCTCCTCCTCCTTTTTCTCATGAGTCTACTCTTTTTGCAACTGGGAACCGGCTTTCTGAGTTTGCAAAGGTTTTGGGTTTGTGTTTTGAGTTTAAACCGGTTCTGACCCCGGTTCATGAGTTGAATGAGTTGAGCTTTGATGTTAAACCTGATGAGGTTTTGGCTGTGAACTTCATGCTTCAACTGTGCAATCTATTGGGGGAGAGTACTGCAATGGTTGAGGGTGCACTTCGTTTGGTCAAGTCTTTGAAGCCAAAGATTGTGAGTCTTGGTGAGTATGAAGCAAGCTTGAACCGTGTTGGATTCTTCAACAGGTTCAAGTCTGCTTTGAAGTACTTCTCAGCAGTGTTTGAGTCTCTTGAGCCAAACATGCAACTAGACTCCCCAGAGAGGCTTCAGGTGGAGAGAATTCTTCTTGGGAGGCGAATTGCGAAGGTTCTGATTGGAGGAGAAAGAATGGAAGACAAAGAGCAGTGGAAGGTTCTGATGGAAAGTTGTGGTTTTGAATCTGTGAGGTTAAGCAATTATGCACATAGTCAAGCTAGGATTCTTCTTTGGAATTACAGCAACAGTTCAAGCTATTCCTTGGTTGAGTCTGAACCTGGGTTTTTGTCTCTGGCATGGAATGATGTACCTCTCTTCACTGTCTCTTCATGGTGTTGA 1341 0.4847 MMFSIHGTTTTPSSPLTSPTHFSSLLLCRRAHPPPSSSPTSSDDWIDSLIFPPSPTPPLPPPDNSDYPTHTLLHTLIDCAWLSDTDPHRAAECLIHLMNSASHSGDPTQRVAFYFIEALRTKLSLWPHDNKDPTFPMMDTTPEDYYTLSYKAFIEACPYSNFTHLTANQAILEATEAATNIHIIDFGILHGIQWPALLQAFATRSSGKPHSIKISGVPSMSHKASSSPPPFSHESTLFATGNRLSEFAKVLGLCFEFKPVLTPVHELNELSFDVKPDEVLAVNFMLQLCNLLGESTAMVEGALRLVKSLKPKIVSLGEYEASLNRVGFFNRFKSALKYFSAVFESLEPNMQLDSPERLQVERILLGRRIAKVLIGGERMEDKEQWKVLMESCGFESVRLSNYAHSQARILLWNYSNSSSYSLVESEPGFLSLAWNDVPLFTVSSWC* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1248 446 ProSiteProfiles GRAS family profile. 63 446 IPR005202 -
Dod02g1248 446 Pfam GRAS domain family 73 445 IPR005202 -
Dod02g1248 446 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 73 445 - -
Dod02g1248 446 MobiDBLite consensus disorder prediction 51 65 - -
Dod02g1248 446 MobiDBLite consensus disorder prediction 33 66 - -
Dod02g1248 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 73 445 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1248 Dod-Chr2 15174560 15176339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1248 72 445 GRAS Transcription Factor Family AT5G66770 59.737 4.42e-152 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod02g1248 GRAS 7e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1248 - - aprc:113865332 449.899