Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1224 ATGGCAGAAGAGGATGCGAAACCGTTGAACTACATTCCAGAGGTTATACTCAAGAAGAGAAAAACCAACGAAGCATTCGCCTTGAGGAAAAAGGCTCAATTCGAGCGCACCAATTTCCACTCCAAGAAGACCAACGACTCCATCAAAAAACCCGAGGATTTCGTTTTGGAGTATCGCAACATGGAGCTGGACCTTATTAGAATGAAACGCAGGGTCAAGAGGAAACTACCGGAATTGAACTCAAACTCCAAGCCCTTGATAATCATTCGGATTCAGGGGAAAAAGGACATGCATCCAAAAACTAGGAAGGTTTTGTATAGCTTGGGGTTGAGAAGGATATTCGGTGCTGTCTTTGTGAAGCCATCCGAGGGTGTATTGGCCAAGCTGCAAAGGGTGGAACCATTTGTTACCTATGGATATCCAAATCTCAAGAGCATAAAGGAGCTAATTTACAAGAAGGGCCATGCGAAAATAGACAAGAGGAAAGTTCCTTTGACAGATAATAACATTATTGAGCAGGAATTAGGAAAGTTTGGTATTGTATGCATAGAAGACATGGTGCATCAGATTGCTAATGTTGGTCCACACTTCAAGGAAGTTGTCAGATTTTTGTGGCCCTTTGAACTAAACAAACCAGAAGAAGGATTGAGGGGATCAAAAACCCTATTCAAGAATGGTGGAGACACAGGGAACCGTGAGGATCTCATCAACGAACTAATCTCTAGAATGAATTAA 735 0.4231 MAEEDAKPLNYIPEVILKKRKTNEAFALRKKAQFERTNFHSKKTNDSIKKPEDFVLEYRNMELDLIRMKRRVKRKLPELNSNSKPLIIIRIQGKKDMHPKTRKVLYSLGLRRIFGAVFVKPSEGVLAKLQRVEPFVTYGYPNLKSIKELIYKKGHAKIDKRKVPLTDNNIIEQELGKFGIVCIEDMVHQIANVGPHFKEVVRFLWPFELNKPEEGLRGSKTLFKNGGDTGNREDLINELISRMN* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1224 244 CDD Ribosomal_L7_archeal_euk 86 244 IPR035808 -
Dod02g1224 244 Pfam Ribosomal L30 N-terminal domain 12 75 IPR012988 -
Dod02g1224 244 SUPERFAMILY Ribosomal protein L30p/L7e 87 244 IPR036919 -
Dod02g1224 244 PANTHER 60S RIBOSOMAL PROTEIN L7-1 3 244 - -
Dod02g1224 244 PANTHER 60S RIBOSOMAL PROTEIN L7 3 244 IPR039699 -
Dod02g1224 244 TIGRFAM uL30_euk: 60S ribosomal protein uL30 13 244 IPR005998 GO:0000463|GO:0003735|GO:0022625
Dod02g1224 244 Gene3D - 86 244 IPR036919 -
Dod02g1224 244 Pfam Ribosomal protein L30p/L7e 86 136 IPR016082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1224 Dod-Chr2 14960938 14963396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1224 1 244 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 56.275 6.38e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1224 K02937 - gmx:100500005 396.356