Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1219 ATGGACATGCCTTCTTCTTCAAATACTACAGCCCGGCATCACCATACTGGTGCTGCTACTTCACCATACAGAGGTGTCCGCAAGAGGAAATGGGGAAAGTGGGTGTCCGAAATCCGTGAGCCAGGGACCAAGACAAGAATATGGCTTGGAAGCTTCGAGACGCCGGAGATGGCAGCAGCAGCATATGACGTTGCAGCTTTGCACTTCAGGGGGCGTGATGCGAGGCTTAACTTCCCTGAACTTGCAACCACCCTCCCTCGCCCCGTCAGCAACAATGCTGACCACATACGCATGGCTGCGCATGAGGCAGCTCTCCGGCTTAGGACCAATGCCCCGGCAGCAGAGCCTGGTGGTGGGACCATGACTACCTCCAGTTCTGCTGCCGAGGCGCCGGTCACGGTGAGGCTCTCCCCCACACAGATTCAAGCCATCAATGACTCCCCTCTGGACTCGCCCAAGACGTGGATGCAAGTGCCGGACACGTTCATGTTGGATGACTCCATGGTGTTTGCAAATGGGTATGATCAGTTTGATGAGGACAATGAGTGGAATGATTCTCTTTGGGATCCTTAG 573 0.5515 MDMPSSSNTTARHHHTGAATSPYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARLNFPELATTLPRPVSNNADHIRMAAHEAALRLRTNAPAAEPGGGTMTTSSSAAEAPVTVRLSPTQIQAINDSPLDSPKTWMQVPDTFMLDDSMVFANGYDQFDEDNEWNDSLWDP* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1219 190 MobiDBLite consensus disorder prediction 1 24 - -
Dod02g1219 190 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Dod02g1219 190 Pfam AP2 domain 23 71 IPR001471 GO:0003700|GO:0006355
Dod02g1219 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 189 - -
Dod02g1219 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF021 14 189 - -
Dod02g1219 190 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Dod02g1219 190 MobiDBLite consensus disorder prediction 1 16 - -
Dod02g1219 190 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Dod02g1219 190 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Dod02g1219 190 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Dod02g1219 190 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Dod02g1219 190 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1219 Dod-Chr2 14896177 14897648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1219 3 190 AP2-EREBP Transcription Factor Family AT1G71450 55.851 6.68e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g1219 AP2 3.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1219 - - gmx:100815719 294.278