Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod02g1214 | ATGGCGAAGAACGAATGGGGCAATTCCATCTATCCACTAGTCCCTGGGCATGAAATTGTTGGAATAGTGACAAAGGTGGGGAGCAAAGTGCAAAAGTACAAAGTTGGGGACAAAGTTGGTGTGGGAGGCTTGGTTGAATCCTGCCGCTCCTGCCAAAAATGTGCTGACAATCTTGAGAATTACTGCTCACAATATACTCTGACATATAATGGTAGATATACTGATGGTACCAACACATACGGAGGCTACTCTGACTCAATGGTTGTTGATGAGCACTTTGCGGTTTCCGTTCCTGATGAGTTGCCTCTTGATGCTGCTGCTCCCCTCCTTTGTGCTGGGATCACGGTGTATAGCCCTCTCAGGTATTTTGGACTTGATAAGCCTGGTCTGCATGTGGGTGTGGTTGGTCTTGGTGGGCTAGGCCATGTGGCTGTTAAATTTGCAAAAGCTTTTGGGGTTAAGGTGACAGTAATCAGTACATCACCCAACAAAAAGAAAGAAGCCATAGAACATCTGGGAGCTGACTCGTTTCTCATAAGCCATGACCATGATCAGATGCAGGCTGCAAAGGGAACTTTGGATGGTATTATTGACACAGTTTCTGCCGTTCATCCTCTCTTACCTTTGCTTGAGTCACTGAAATCTCATGGAAAACTTATAATGGTTGGGGCGCCAGAGAAGCCTCTGGAGTTGCCAATCATTCCTTTACTTACTGGGAGAAGAATGGTAGTTGGCAGTGGCGGTGGAGGGATGAAGGAAACCCAAGAAATGATGGATTTTGCTGCTAAGCATAATGTGAAACCTGACATTGAGGTTATTCCTATTGATTATGTGAACACAGCGATGGAGCGCCTCCTCAAAACAGATGTGAAATACCGATTTGTGATTGACATTGGAAACACTCTGAAACAAAGCTCTTAA | 921 | 0.4517 | MAKNEWGNSIYPLVPGHEIVGIVTKVGSKVQKYKVGDKVGVGGLVESCRSCQKCADNLENYCSQYTLTYNGRYTDGTNTYGGYSDSMVVDEHFAVSVPDELPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHVAVKFAKAFGVKVTVISTSPNKKKEAIEHLGADSFLISHDHDQMQAAKGTLDGIIDTVSAVHPLLPLLESLKSHGKLIMVGAPEKPLELPIIPLLTGRRMVVGSGGGGMKETQEMMDFAAKHNVKPDIEVIPIDYVNTAMERLLKTDVKYRFVIDIGNTLKQSS* | 307 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod02g1214 | 306 | Gene3D | - | 112 | 268 | - | - | |
| Dod02g1214 | 306 | SUPERFAMILY | GroES-like | 3 | 129 | IPR011032 | - | |
| Dod02g1214 | 306 | Pfam | Alcohol dehydrogenase GroES-like domain | 5 | 96 | IPR013154 | - | |
| Dod02g1214 | 306 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN | 1 | 305 | - | - | |
| Dod02g1214 | 306 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 101 | 267 | IPR036291 | - | |
| Dod02g1214 | 306 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 16 | 30 | IPR002328 | GO:0008270|GO:0016491 | |
| Dod02g1214 | 306 | Gene3D | - | 1 | 298 | - | - | |
| Dod02g1214 | 306 | CDD | CAD1 | 1 | 297 | - | - | |
| Dod02g1214 | 306 | Pfam | Zinc-binding dehydrogenase | 139 | 262 | IPR013149 | - | |
| Dod02g1214 | 306 | PANTHER | ALDEHYDE REDUCTASE | 1 | 305 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod02g1214 | Dod-Chr2 | 14868723 | 14871334 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod02g1214 | 1 | 303 | Monolignol Biosynthesis Gene Families | AT4G37990 | 68.977 | 1.52e-137 | 391 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod02g1214 | - | - | gmx:100816901 | 467.618 |