Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1208 ATGAGTCGCAGTTCGGGGATGCACGCAACAACATCAACATCAACATCATCAACAACAACAAGAACAAGTGGTGGTGGCGCCAAGAAGCTGAAGGGTGTTCGTTGTAGAAAGTGGGGGAAGTGGGTGTCGGAGATTCGTGTCCCTGGGACGCAAGAGCGCCTTTGGTTGGGAACCTATGCGACACCGGAGGCAGCAGCGGTGGCTCATGATGTGGCTGTCTACTGTCTGAGGAGGCCTTCTTCTTTGGACAAGCTTAACTTCCCCGAAACCTTGTCTTCTTACTCTATTCTCCAGCAGCCTAGGGACTTGTCTCCCGGGTCTGTTCAGAAGGTGGCTTCCGATGTTGCCATGGATGTTGATGCCAGCAACATTATTGCAGCTTCAGGAGGGACAACGCAGCAGCAAACAAACACTAGTACTTGTGAAAGAGGCAACAACAATGTTGGTGTTGGAGCCGGTGTTGATGGTTCAGCAGCTGGTGTGCCTTGGTGGGATGGTTTGGGTGATGATCATGATTGTGGCACTTTCCAAGGAAGTGAAAGTGAAGAAGGTCGTGGAGAAGGGGAGGCCTTGAGCATTTCCGTTGAAGATTATTTTTAG 600 0.5083 MSRSSGMHATTSTSTSSTTTRTSGGGAKKLKGVRCRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVAVYCLRRPSSLDKLNFPETLSSYSILQQPRDLSPGSVQKVASDVAMDVDASNIIAASGGTTQQQTNTSTCERGNNNVGVGAGVDGSAAGVPWWDGLGDDHDCGTFQGSESEEGRGEGEALSISVEDYF* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1208 199 CDD AP2 28 90 IPR001471 GO:0003700|GO:0006355
Dod02g1208 199 MobiDBLite consensus disorder prediction 1 25 - -
Dod02g1208 199 MobiDBLite consensus disorder prediction 174 199 - -
Dod02g1208 199 SUPERFAMILY DNA-binding domain 29 88 IPR016177 GO:0003677
Dod02g1208 199 ProSiteProfiles AP2/ERF domain profile. 29 88 IPR001471 GO:0003700|GO:0006355
Dod02g1208 199 MobiDBLite consensus disorder prediction 1 31 - -
Dod02g1208 199 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Dod02g1208 199 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Dod02g1208 199 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF020 14 139 - -
Dod02g1208 199 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 139 - -
Dod02g1208 199 SMART rav1_2 29 94 IPR001471 GO:0003700|GO:0006355
Dod02g1208 199 Gene3D AP2/ERF domain 29 90 IPR036955 GO:0003700|GO:0006355
Dod02g1208 199 MobiDBLite consensus disorder prediction 175 190 - -
Dod02g1208 199 Pfam AP2 domain 29 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1208 Dod-Chr2 14800504 14801620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1208 29 150 AP2-EREBP Transcription Factor Family AT1G71520 50.794 2.39e-37 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g1208 AP2 1.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1208 - - gmx:100816257 197.593