Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1203 ATGGGGTGCATCTGCTCAAAAGATTGCTCAGAAAAAGAGAGAATTGATGAGTATGATATAGAAAAAGGGCTGAACAAGTCTTCAGTGCAACTTGTTGCTCCTTCAGTCTCGGCTGCACAATTAGATGGTGGTGGCATGGACGCTTCAGTGGTGCCCCATTTGGCAAAGTCATACTCACAAATCATTAGGGGTCTATCAGAATATAAAAACAATGGCTTATTAGATGTTGGAAAACACACAAAAGGCCATCATCAGAGATGTATAACAACGGTAGGCGCCGGTGTGGGTGAAAGAAAGCCAGTGATGAGTAGAATACTTAGCGTGCAACATGTGTCAGGAGAACTCAATGATGCTGGATGGCCATCATGGTTATCTTCGGTAGCGGGAGAAGCCATCAAAGGGTGGGTTCCTCGAAGGGCAGACTCTTTTGAAAAATTAGACCAAATTGGACAAGGGGCTTATAGCAGTGTGCATAAAGCTCTTGACCTTGAAACTGGCAAACTTGTGGCTTTGAAGAAAGTTCGGTTCTCAAGTACAGATTCGGAAAGTGTCCGTTTCATGGCAAGGGAAATCTATATCTTGCGCCAACTTGACCATCCAAATGTCATAAAGCTTGAGGGTCTTGTTACATCAAGATCTTCCACCAGTTTGTACCTTGTTTTTGAATACATGGAGCATGACCTTGCTGGACTAGCAGCAAGACCTGGCACGAAGTTCACTGAACCACAGATTAAATGTTACATGCAGCAACTGCTTCGTGGGCTTGAACACTGTCATAGTCGCGGTGTTCTGCACCGTGACATCAAGGGTTCAAATCTCCTGATTGACAACAATGGAAATCTTAAGATTGGAGATTTTGGTCTTGCAACTGTTTATGAACCTGAAAAAAAACAGCCATTGACTAGCCGTGTTGTGACACTGTGGTATAGGGCACCTGAGCTTCTGCTAGGTGCTACAGAGTATGGAGCTGGAATAGACCTGTGGAGTACTGGTTGCATTCTAGCGGAATTGCTGGTAGGGAAGCCTATTATGCCTGGAAGAACAGAGGTGGAACAAATGCACAAGATTTTTAAGCTTTGTGGATCCCCATCTGAAGATTATTGGCAGAGAACTAAGTTTCCTCATGCAACTAGTTTTAAACCACAACACCCTTACGAGCGCCGAATCGCTGAAACATTTAAGAATTTCTCTCCTTCAGCATTGGCCCTTGTTGATAATCTCCTTGCGGTAGAACCAGAAGATCGAGGATCTGCAACTTCCGCGCTTGAGAGTGAGTTCTTCGCTACAGAACCCCTACCATGTGATCCATCGAGTTTACCAAAGTTCCCACCCAGTAAGGAGTTTGATGCCAAGCGTCGAGATAAGGAAGTAACAAGGAAAAACAATGAAGCTGCAAATGGACGAGGACCAGCATCTGTTTTGAGGGGAGCAGGAGGTAACAAAATACCGAGAACACCAGAGTACAATGCAAAGGGAAATATATCATTGCGGGGCAAGCCAAACACTAGAATGTCCCGTCTTAAATATGAGTCCCAAGAGGATGGTGAATCTCACTCTCACCATAAGGTTGAGAAAGCCATAGTATCTATGCATGGTGGCTATGTACATTCTTCTTCAATGATGCAAGTTGGTACAGCAGGACCATCCTCATCGAATAAGAGATCAGATTCATCACCTGGGAAGAAACCAGAGTTACGGACACAGAGGTCTCAGGTGAATCAAGCAACTGCAGATTTCTCTGCCTCTGCTATCAGAAAGGAACAAGGCCTGCCTGGTCGAGAACCCGGGATGGGGTATGTGCCTAAGAAAAGCAGGATACACTGCTCTGGACCATTGATGCCTCCGGGGGGAAACATTGACGACATGCTCAGAGAGCATGAGAAATTAATGCAAGAGGCTTTCCGTAGTGGTGTCAAGAAGACCAATCCCAAAAACCAAAGTTACAGATAA 1950 0.4503 MGCICSKDCSEKERIDEYDIEKGLNKSSVQLVAPSVSAAQLDGGGMDASVVPHLAKSYSQIIRGLSEYKNNGLLDVGKHTKGHHQRCITTVGAGVGERKPVMSRILSVQHVSGELNDAGWPSWLSSVAGEAIKGWVPRRADSFEKLDQIGQGAYSSVHKALDLETGKLVALKKVRFSSTDSESVRFMAREIYILRQLDHPNVIKLEGLVTSRSSTSLYLVFEYMEHDLAGLAARPGTKFTEPQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDNNGNLKIGDFGLATVYEPEKKQPLTSRVVTLWYRAPELLLGATEYGAGIDLWSTGCILAELLVGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQRTKFPHATSFKPQHPYERRIAETFKNFSPSALALVDNLLAVEPEDRGSATSALESEFFATEPLPCDPSSLPKFPPSKEFDAKRRDKEVTRKNNEAANGRGPASVLRGAGGNKIPRTPEYNAKGNISLRGKPNTRMSRLKYESQEDGESHSHHKVEKAIVSMHGGYVHSSSMMQVGTAGPSSSNKRSDSSPGKKPELRTQRSQVNQATADFSASAIRKEQGLPGREPGMGYVPKKSRIHCSGPLMPPGGNIDDMLREHEKLMQEAFRSGVKKTNPKNQSYR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1203 649 ProSiteProfiles Protein kinase domain profile. 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1203 649 MobiDBLite consensus disorder prediction 539 620 - -
Dod02g1203 649 SMART serkin_6 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1203 649 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Dod02g1203 649 PANTHER CELL DIVISION PROTEIN KINASE 88 640 - -
Dod02g1203 649 MobiDBLite consensus disorder prediction 564 581 - -
Dod02g1203 649 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 88 640 - -
Dod02g1203 649 Gene3D Transferase(Phosphotransferase) domain 1 226 467 - -
Dod02g1203 649 CDD STKc_CDK9_like 143 427 - -
Dod02g1203 649 Pfam Protein kinase domain 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1203 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Dod02g1203 649 MobiDBLite consensus disorder prediction 445 462 - -
Dod02g1203 649 MobiDBLite consensus disorder prediction 539 556 - -
Dod02g1203 649 MobiDBLite consensus disorder prediction 433 503 - -
Dod02g1203 649 SUPERFAMILY Protein kinase-like (PK-like) 136 435 IPR011009 -
Dod02g1203 649 Gene3D Phosphorylase Kinase; domain 1 130 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1203 Dod-Chr2 14763098 14767131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1203 135 465 Core Cell Cycle Gene Families AT5G10270 52.601 1.65e-121 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod02g1203 Pkinase 2.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1203 K08819 - gmx:100791743 917.531