Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1191 ATGGCAGAACACAATTATTATTGTCCATCTGAAACTTCCACATCATCCAAAAGAAATGGCCTCAATGTTGAACATCACAAACATATGGAGAAAATGACGAGCAAGGAAGAACTAACATTCGAACCAGATGAAGCCACCGACCCCAATTCTATGGCTGTGTTGAATTCGGTGGAGCTGTCCAAAGATGATTCTGTTTGTGGATCCAAGGCTGAATTTGATTTTTTCAACCATGGGAAGGCGGTAGCTGGTTCATCTTCTTGGACTAGAAACCATCAAGGTGGAGATGATGATGAGAACACTAATAAGGAAAACACATCTGAACCAAGGACTTTCTCATGCAACTTCTGCAAGAGAGAATTCTCTTCTTCACAAGCTTTGGGAGGACACCAAAACGCTCACAAGCAAGAGCGTGCAATCGCAAAGCGTCGCCAGGGGATTGATGCCACCGGTGTTTTTGGGCACCCTCATCATCACTTTCCTTATTGTTACCCTTATCCTAGCCTCTCCACGCACCCCTTGTATGGTGGTTCCTATAATAATAGGGCACTTAGGGTTTCAATGGAGCCTCATAAGCCTCCCTATACTAATTGGATTAGCCTCAGTTATGGTCATAGTGCAGGGTGGCCAAGGCAAGGGATGCTAGATCCACTGCAAGCACATGGAAGTAGTGGAGCTGCAACTACTATGACAAGTGCTTCAACCTTGATAGAAAATGATGATGGTGCCACTGGACTTATTCCCCATCCGAGCTCTTCTTCTATAAATATTGTTGCTGTTAGTCCAAATTCAACCTTCGACAAACCAATTCAGGAGGACAAGGATGATGATCAACCCAAACAAGAAGAGTCATCCAGTACGAAGCATTCTGAGCTTGATTTGACACTTAAACTCTAA 894 0.4396 MAEHNYYCPSETSTSSKRNGLNVEHHKHMEKMTSKEELTFEPDEATDPNSMAVLNSVELSKDDSVCGSKAEFDFFNHGKAVAGSSSWTRNHQGGDDDENTNKENTSEPRTFSCNFCKREFSSSQALGGHQNAHKQERAIAKRRQGIDATGVFGHPHHHFPYCYPYPSLSTHPLYGGSYNNRALRVSMEPHKPPYTNWISLSYGHSAGWPRQGMLDPLQAHGSSGAATTMTSASTLIENDDGATGLIPHPSSSSINIVAVSPNSTFDKPIQEDKDDDQPKQEESSSTKHSELDLTLKL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1191 297 MobiDBLite consensus disorder prediction 20 36 - -
Dod02g1191 297 MobiDBLite consensus disorder prediction 1 36 - -
Dod02g1191 297 MobiDBLite consensus disorder prediction 83 108 - -
Dod02g1191 297 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 14 297 - -
Dod02g1191 297 SUPERFAMILY beta-beta-alpha zinc fingers 108 138 IPR036236 -
Dod02g1191 297 PANTHER ZINC FINGER PROTEIN JAGGED 14 297 IPR045320 GO:0003700
Dod02g1191 297 MobiDBLite consensus disorder prediction 260 297 - -
Dod02g1191 297 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Dod02g1191 297 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
Dod02g1191 297 MobiDBLite consensus disorder prediction 267 297 - -
Dod02g1191 297 Gene3D Classic Zinc Finger 85 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1191 Dod-Chr2 14669986 14670879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1191 101 210 C2H2 Transcription Factor Family AT5G10970 43.363 5.74e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1191 - - ccaj:109807193 194.512