LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod02g1185	ATGATTGCCACTACCTTGTCTGATCCCAATCTTGTTCACGCACCACACCATTCCTTTCCCTCATCCATCTCTCCTTTCCCACTCTCTCTTCACGCTCCCGCTTCTCACCCCAGACGCATCCCTTCTCCTCTCAGATGCCAATCGGTTGGCACCGATAAGCGGAAATCAAGCAGAAATCTGGTGGACAATGCAAGCAACCTGCTTACAAACTTGCTAAGCGGTGGGAGCATAGGGTCCATGCCAATAGCTGAAGGTGCGGTCTCAGATCTGTTTGGTCGACCTCTATTTTTCTCGCTCTATGATTGGTTCTTGGAGCACGGTGCAGTGTATAAACTTGCCTTTGGGCCGAAAGCGTTTGTTGTTGTATCAGATCCCATAGTTGCAAGACACATTCTTCGAGAAAATGCATTCTCCTATGACAAGGGAGTACTTGCTGATATTCTAGAGCCAATAATGGGCAAAGGACTCATACCTGCGGACCTTGACACTTGGAAGGAAAGGAGAAGAGTCATTGCTCCGGGTTTTCACACCGCATACTTGGAAGCTATGGTCAAGATATTCACAACTTGTTCAGGAAGAACAATATCAAAGTTCAATCAGCTTCTCCAACAAGAGGGCTATGATGGACAAAAGTCAATTGTATTAGATCTTGAAGCAGAGTTTTCTAATTTGGCTCTTGATATTATTGGGCTTGGCGTGTTCAACTATGACTTTGGTTCTGTAACCAAAGAATCTCCTGTTATTAAGGCAGTCTATGGCACTCTTTTTGAAGCTGAGCATAGATCCACTTTCTACATTCCGTATTGGAAAATTCCATTGGCAAAGTGGATAGTCCCAAGACAAAGGAAGTTTCAGAATGACCTTAAAATCATCAATACTTGTCTCGACGGACTTATCAGAAATGCAAAAGAGAGCAGACAGGAAACAGACGTTGAGAAACTGCAGCAAAGGGACTACTTAAATTTGAAGGATGCAAGTCTCCTACGTTTCCTAGTTGATATGCGGGGAGCTGATGTTGACGACCGTCAGTTGAGGGATGATTTAATGACAATGCTAATTGCTGGTCATGAGACAACAGCTGCAGTTCTTACTTGGGCAGTTTTCCTGCTAGCTCAAAACTCTGGAAAAATGAAGAAGGCTCAAGCAGAGGTAGATTTGGTGCTGGGTATGGGGAAACCAACTTTCGAATCACTTAAAAAATTGCAGTACATTAGACTTATTGTTGTGGAGGCTCTTCGGTTGTACCCTCAACCACCTTTGTTGATTAGACGTGCACTGAAACCTGATGTTTTACCAGGAGGGCACAGAGGTGATAACAATGGTTATGCGATTCCTGCTGGGACTGATGTCTTCCTTTCTGTATATAATCTCCATAGATCTCCGTATTTTTGGGACCGCCCTCATGACTTTGAGCCAGAGAGATTTCTGGTGCAAAGCAAGAACGAAGAAATTGACGGGTGGGCTGGTTTTGACCCATCTCGAAGTCCTGGAGCTTTGTATCCAAACGAGATTATATCAGATTTTGCATTCTTGCCTTTTGGTGGTGGGCCACGGAAATGTGTTGGGGATCAATTTGCTCTCATGGAGTCCACTGTGGCATTGGCTATGCTGCTGCAGAATTTTGATGTGGAATTGAAGGGTACCCCCGACTCGGTTGAACTAGTTACCGGGGCAACTATCCATACCAAAAATGGATTGTGGTGCAATATGAGAAAGAGATCTGATTTACAGTGA	1734	0.4446	MIATTLSDPNLVHAPHHSFPSSISPFPLSLHAPASHPRRIPSPLRCQSVGTDKRKSSRNLVDNASNLLTNLLSGGSIGSMPIAEGAVSDLFGRPLFFSLYDWFLEHGAVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKERRRVIAPGFHTAYLEAMVKIFTTCSGRTISKFNQLLQQEGYDGQKSIVLDLEAEFSNLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLAKWIVPRQRKFQNDLKIINTCLDGLIRNAKESRQETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNSGKMKKAQAEVDLVLGMGKPTFESLKKLQYIRLIVVEALRLYPQPPLLIRRALKPDVLPGGHRGDNNGYAIPAGTDVFLSVYNLHRSPYFWDRPHDFEPERFLVQSKNEEIDGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALAMLLQNFDVELKGTPDSVELVTGATIHTKNGLWCNMRKRSDLQ*	578

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod02g1185	577	PRINTS	P450 superfamily signature	354	371	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dod02g1185	577	PRINTS	P450 superfamily signature	511	520	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dod02g1185	577	PRINTS	P450 superfamily signature	520	531	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dod02g1185	577	PRINTS	P450 superfamily signature	406	417	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dod02g1185	577	PANTHER	CYTOCHROME P450 97B3, CHLOROPLASTIC	75	573	-	-
	Dod02g1185	577	Pfam	Cytochrome P450	103	567	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dod02g1185	577	SUPERFAMILY	Cytochrome P450	91	573	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dod02g1185	577	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	513	522	IPR017972	GO:0005506\|GO:0016705
	Dod02g1185	577	PRINTS	E-class P450 group I signature	510	520	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dod02g1185	577	PRINTS	E-class P450 group I signature	520	543	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod02g1185	Dod-Chr2	14620965	14628817	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod02g1185	38	574	Cytochrome P450	AT4G15110	77.695	0.0	892

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod02g1185	K24543		-	gmx:606504	998.038

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