Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1164 ATGAACGGAATGCAAGAAAGAAGCATGCTGCTTGAACTCCACGACGGTGCTGATATCGGGTCCTCTTTATCAAAGCTCATACTTTCAAGCGGGACAAACACCCTCGACTCAATTTTCTGCCATTGCGCTGCCCCAGAAAACACAACAACTACAACAACAACAACAACTAACTCTGTTTTCATGGACCCCATCATAGGCTCTTCGGGGTTCGAATCTTGGGGCTCCTCCGTTTACCTAAGACAAAGAGATATCCTTCAAAAGTTCTACCAGGAAAGCCGCGTGATGAATAATAGGCCTTATGTTGTCCCTAGGTCCTTGGTGACTCCATCTCTAAACTCTGTATTCACGAGCTCTGTGGCCTCTTTCATGAACCCCGGGAAGAAGAAGCTCTACAGGGGAGTGAGACAGAGGCACTGGGGAAAATGGGTCGCTGAAATTAGACTCCCTCAGAACAGAATGAGAGTTTGGCTGGGAACTTACGACACTGCAGAAGCTGCAGCTTATGCTTATGACCGTGCGGCTTATAAGCTCCGCGGCGAATACGCGCGTTTGAATTTCCCGAATCTGAAGGACCCCAGCAAGTTAGGATTCGGAGATTCCGCGAGGTTGAATGCTCTCAAGAGCACGGTGGATGCCAAGATTCAAGCGATATGCCAAAAGGTGAAAAGGGAGAGAGCCAAAAAGAATGCTGCAAAGAAGCTTAAACCCAGTGGTGGCGGTGGAGGTGGTGAAAAAAGCCTCTGTGCAGCGCGAGAAAGCGCAGAAGATCAACAACTCATCTTCTAG 786 0.4873 MNGMQERSMLLELHDGADIGSSLSKLILSSGTNTLDSIFCHCAAPENTTTTTTTTTNSVFMDPIIGSSGFESWGSSVYLRQRDILQKFYQESRVMNNRPYVVPRSLVTPSLNSVFTSSVASFMNPGKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSARLNALKSTVDAKIQAICQKVKRERAKKNAAKKLKPSGGGGGGEKSLCAARESAEDQQLIF* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1164 261 Pfam AP2 domain 131 180 IPR001471 GO:0003700|GO:0006355
Dod02g1164 261 Gene3D AP2/ERF domain 130 188 IPR036955 GO:0003700|GO:0006355
Dod02g1164 261 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Dod02g1164 261 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Dod02g1164 261 CDD AP2 129 189 IPR001471 GO:0003700|GO:0006355
Dod02g1164 261 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 232 - -
Dod02g1164 261 SUPERFAMILY DNA-binding domain 130 187 IPR016177 GO:0003677
Dod02g1164 261 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Dod02g1164 261 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Dod02g1164 261 MobiDBLite consensus disorder prediction 227 261 - -
Dod02g1164 261 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 8 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1164 Dod-Chr2 14415400 14417340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1164 17 230 AP2-EREBP Transcription Factor Family AT1G64380 53.390 4.20e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g1164 AP2 4.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1164 - - lja:Lj0g3v0046879.1 282.337