Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1163 ATGACGCGTGAAGAAGCTCAGAATGAAACAGACGAAATGCTCCTTGATGGCCATGAACCAGAAGTGCCCAACCAAGGTGAAGGCAGTGCCCTTCCTGACGAGTTCAATGCCAATTATCTCAAGATATACTACAGTAAGCTATTTCCTCATGCTGATTTATATAGATGGATGTCTTATGGCAATGATGGGAAGCATCCCGCTTGTGATCCATCTTACTTGGGACGAAGGGAATTTTCATTCACATTGGACAATGATATATATGTGCGCTACCAATCTTTCAATAGTGCTGCTGAACTTGAAAATTCAATCAAAGACAAGTGTCCGTTTAAGATAGATATTGGACCTGTCTACAGCTTGGATCCTGCAAAACGGCAGTCTTATAGTGGAGATAATGTTTTCACTCCAGTTGAGAGGGAGCTGATTTTTGATATAGATATATCAGATTATGATGATGTTAGATACTGCTGCTCAGGCGCTGATGTTTGTTTGAATTGCTGGCCATTAATGACTATAGCTATCAAAGTAATTGATACTGCCTTAAGAGATGACTTTGGTTTTAGACACATTCTCTGGGTATATAGTGGTCGGCGTGGTGTTCATTGTTGGGTCTGTGATAGAAAGGCAAGAAGGTTGGCTAATGAGCAGAGAGGAGCAATTGCTGACTATTTTCGCGTCTACAAGGGAAATGAAAATAGCTATAAGAAGGTTTCTTTGATGGGTCCAGCTCTTCATCCCTTTCTGGCGAGATCATATACTGAAGTTCTCAAAGAGTTTTTTGAGACAAAACTGCTTACAAGTCAAAATATACTTTCTAGTGAGGAAAGATATGAGAAGATCCTAGAGATGATTCCTGATCAATCTATTACTTCTGAACTTCGTGGCAAGTGGCAAGACAGCAGGCGGTCATCCAGTGCAAAAGAAGACATTAATGTTGTTCGATGGGAACAGCTTAAACAGTTCCTACAATCAGGAAAACATAAGGCACAAGGGTTGCGTAGGTGTGTTGAAGAGATTGTGTTCTCCTTTACTTACCCCAGGCTTGATATGGAGGTTTCAAAGCATATGAATCATCTGCTTAAAGCACCATTTTGTGTACACCCAAAAACAGGCCGTGTTTGTGTCCCTATTGACCCAAATCACTGTGAAGAATTCGATCCTACCACAGTGCCAACCCTTTCACAGCTTTTGGAAGAGCTTAATAAAGAGGGCTTGAGAGTTGACGCTGAAGGAGAATGGAATAAAACTTCACTTGGAAATGCCATCAGGCTTTTCAGATCGTCATTCTTACTGCCATTGCTAAAAGCTTGCAAGGAGGATATTGAAAGTTCCTATAATGCGAAGTTGCAGCAGTCAAAGAATCTCCTAAGTTGGTAG 1374 0.4112 MTREEAQNETDEMLLDGHEPEVPNQGEGSALPDEFNANYLKIYYSKLFPHADLYRWMSYGNDGKHPACDPSYLGRREFSFTLDNDIYVRYQSFNSAAELENSIKDKCPFKIDIGPVYSLDPAKRQSYSGDNVFTPVERELIFDIDISDYDDVRYCCSGADVCLNCWPLMTIAIKVIDTALRDDFGFRHILWVYSGRRGVHCWVCDRKARRLANEQRGAIADYFRVYKGNENSYKKVSLMGPALHPFLARSYTEVLKEFFETKLLTSQNILSSEERYEKILEMIPDQSITSELRGKWQDSRRSSSAKEDINVVRWEQLKQFLQSGKHKAQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNHCEEFDPTTVPTLSQLLEELNKEGLRVDAEGEWNKTSLGNAIRLFRSSFLLPLLKACKEDIESSYNAKLQQSKNLLSW* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1163 457 PANTHER DNA PRIMASE 46 457 - -
Dod02g1163 457 SUPERFAMILY Prim-pol domain 36 401 - -
Dod02g1163 457 CDD AE_Prim_S 49 386 IPR014052 GO:0003896|GO:0006269
Dod02g1163 457 Gene3D DNA primase, PRIM domain 27 438 - -
Dod02g1163 457 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 41 397 IPR014052 GO:0003896|GO:0006269
Dod02g1163 457 Pfam DNA primase small subunit 142 377 IPR002755 GO:0003896|GO:0006269
Dod02g1163 457 MobiDBLite consensus disorder prediction 1 28 - -
Dod02g1163 457 PANTHER DNA PRIMASE SMALL SUBUNIT 46 457 IPR014052 GO:0003896|GO:0006269
Dod02g1163 457 MobiDBLite consensus disorder prediction 1 18 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1163 1 457 Core DNA Replication Machinery Family AT5G41880 64.783 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1163 K02684 - csin:114313298 769.615