Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1159 ATGGAAAATGACGGGAGTTGGGAGCAGAACGCACTGAGAAATGAGCTAATTCAGGGAATGGAGGTGGCCAGAAAGCTTCAGGCAGACTTTAAGTCAGCATCTTTTGCTGACAATAGGGACTTGCAGGTGCAGAGGTTAATATCCTCTTATGACAGAGCTCTACTAATTCTAAGTTGCAATGCATCAATTTCCAAGTCACAGACCACGCATCATGCAACTATAACCTCATCACCAGGGTCCCCTATCCCTCTATCTGTCAGCATTAGTCCCCCGAGGAAGAACAATGATGGGTCACTGAAGGATCATCAGGAGCTTAAACATTGTTCAAAGAAAAGAAAGGAGACGCCAAAATGGGTGGATCAGGTTAAGGTGAACTCTGACAATGGCATTGAAGGAACTCAGGATGATGGCTACAACTGGAGAAAATACGGACAGAAAGACATTCTTGGTGCAAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAACTCAAAGGGCTGCTGTGCGACGAAGCAAGTACAGAGATCAGATGAAGATCCTACTATCTTTGACATAACTTACCGAGGAAGCCATACCTGCTCGAAGGGGAACAATGCCCTTCTGCCACCGAAGTCACCAGACGTACAAGAGAAACCCCATAGTTACAGTAGTGCTATTTACCATTCACCACCATCATACGAAAGCCTTACAAACTTCAGGAAAATGTTGACTCCCCCTGCTTACAACATGGGAAACCCTTTCACTTCCCCTACCAATTCGTTTGGATGCACGACACAAGAAAACCATAGCTTGATTCCTTCGGTACCAGAGAATAATTCCTTCTTCTGCAGCCTTTCCCAAACACATTTGCTATCTCCAAACACACCAGAATCAACCTATTTTCCATCTCCGGCTTTCCAGATGAATGAGTATGATGGGATCTATAGCAAGCCATGCTCAGAATCTGATGTTAATGAGATAATTTCCACCAACACATCAACCACCAATTCTCCAATTTTCAATTTGGATTTCGATTTCACACTTGAACCAGTGGAAATTGATCCAAATTTCGCTTTCGATAGCTACGAATTTTTCCCCTAG 1083 0.4386 MENDGSWEQNALRNELIQGMEVARKLQADFKSASFADNRDLQVQRLISSYDRALLILSCNASISKSQTTHHATITSSPGSPIPLSVSISPPRKNNDGSLKDHQELKHCSKKRKETPKWVDQVKVNSDNGIEGTQDDGYNWRKYGQKDILGAKYPRSYYRCTFRNSKGCCATKQVQRSDEDPTIFDITYRGSHTCSKGNNALLPPKSPDVQEKPHSYSSAIYHSPPSYESLTNFRKMLTPPAYNMGNPFTSPTNSFGCTTQENHSLIPSVPENNSFFCSLSQTHLLSPNTPESTYFPSPAFQMNEYDGIYSKPCSESDVNEIISTNTSTTNSPIFNLDFDFTLEPVEIDPNFAFDSYEFFP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1159 360 MobiDBLite consensus disorder prediction 70 117 - -
Dod02g1159 360 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1159 360 SUPERFAMILY WRKY DNA-binding domain 133 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g1159 360 MobiDBLite consensus disorder prediction 70 94 - -
Dod02g1159 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 355 IPR044810 GO:0003700
Dod02g1159 360 MobiDBLite consensus disorder prediction 95 117 - -
Dod02g1159 360 Gene3D WRKY domain 119 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g1159 360 MobiDBLite consensus disorder prediction 197 216 - -
Dod02g1159 360 Pfam WRKY DNA -binding domain 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1159 360 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 355 - -
Dod02g1159 360 ProSiteProfiles WRKY domain profile. 129 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1159 Dod-Chr2 14391098 14392473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1159 7 340 WRKY Transcription Factor Family AT4G11070 34.957 1.73e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod02g1159 WRKY 6.5e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1159 - - gmx:100815760 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1159 02 14391098 14392473 Dod04g2805 04 52077146 52078467 PCT