Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1137 ATGGGCAATTGCAGCAGCACCACCGCACCCTCTTCCCAAACCCATCACAACTACGACGACACTCCCAACCACCGCCCCTCCAATAACGGCATCACTGTTCTCCCTCCCAACTCCAACCCCACACCGCCAAAACCAAAACCACCCGCACCCTCCTCATCATCATCCCCGACGGGCCGGGTCTTGGGCCGGCCCATGGAGGACGTCCGGTCCACCTACGTCTTCGGTCGGGAACTGGGCCGCGGGCAATTCGGCGTGACGTACCTGGTGACCCACAAGGTGACGAAGCAGCAGTTCGCGTGCAAGTCAATCGCGACGCGGAAGCTGGTGAACCGCGACGACATCGAGGACATCCGGAGGGAGGTGCAGATCATGCACCACCTGACCGGCCACCGCAACATTGTGGAGCTGAAGGCGGCGTACGAGGACCGCCACTCCGTCAACCTCATCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGCATCATCGCCAAGGGGCACTACTCGGAGCGCGCCGCCGCAAACCTCTGCCGCCAGATCGTGACGGTTGTCCATAACTGCCACTCCATGGGAGTGATGCATAGGGACCTCAAGCCCGAGAACTTCTTGCTCCTCAGCAAGGACGAGAACTCGCCTCTTAAGGCCACCGACTTTGGTCTCTCCGTCTTCTTCAAGCCAGGGGATGTGTTTAGAGATCTTGTTGGGAGTGCGTATTATGTTGCTCCTGAGGTGCTGCGCAGGAGCTATGGGCCTGAAGCTGATATTTGGAGTGCTGGTGTTATCTTGTACATTCTCCTCTCTGGTGTCCCACCCTTTTGGGCTGAAAATGAACAGGGTATATTCGATGCTATTCTTCGTGGACACATTGATTTCGCATCAGATCCTTGGCCTTCCATTTCTAGTAGTGCCAAGGATCTGGTCAAGAAGATGTTACGTGCTGACCCCAAGGAAAGGCTTTCAGCAGTTGAAGTCCTTAATCATCCTTGGATGAGAGAAGATGGAGCATCTGATAAGCCTCTTGACATTGCTGTGTTAACCAGAATGAAACAATTCAGGGCAATGAACAAGCTTAAGAAAGTTGCTTTGAAGGTTATTGCTGAAAATCTTTCTGAAGAAGAAATCATTGGCTTGAAAGAAATGTTCAAAAGTATGGACACAGATAACAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTCCCCAAACTCGGTACTAAGCTTTCTGAGTCTGAAGTAAGGCAGTTGATGGAGGCGGCTGATGTCGACGGAAATGGAACCATTGATTATATTGAATTTATAACAGCTACCATGCACATGAATAGAATGGAAAGAGAGGACCACCTATATAAAGCCTTTGAATATTTTGACAAGGATAGAAGCGGGTACATCACAATGGAGGAGTTGGAATCTGCCCTTAAGAAGTATAATATGGGTGATGAGAAAACAATCAAGGAAATTATAGCCGAAGTTGATACGGACCATGTATTCTGCTTTCTTCTCTATTTTTTTCTTTCCCTCATGGGTTTCATCGCTCATCTCATTGTTCCTTACCCGGTGTAA 1563 0.5042 MGNCSSTTAPSSQTHHNYDDTPNHRPSNNGITVLPPNSNPTPPKPKPPAPSSSSSPTGRVLGRPMEDVRSTYVFGRELGRGQFGVTYLVTHKVTKQQFACKSIATRKLVNRDDIEDIRREVQIMHHLTGHRNIVELKAAYEDRHSVNLIMELCAGGELFDRIIAKGHYSERAAANLCRQIVTVVHNCHSMGVMHRDLKPENFLLLSKDENSPLKATDFGLSVFFKPGDVFRDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHIDFASDPWPSISSSAKDLVKKMLRADPKERLSAVEVLNHPWMREDGASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDRSGYITMEELESALKKYNMGDEKTIKEIIAEVDTDHVFCFLLYFFLSLMGFIAHLIVPYPV* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1137 520 MobiDBLite consensus disorder prediction 36 52 - -
Dod02g1137 520 CDD EFh 377 436 IPR002048 GO:0005509
Dod02g1137 520 Gene3D Transferase(Phosphotransferase) domain 1 158 348 - -
Dod02g1137 520 Gene3D - 349 438 - -
Dod02g1137 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 495 - -
Dod02g1137 520 SMART efh_1 448 476 IPR002048 GO:0005509
Dod02g1137 520 SMART efh_1 376 404 IPR002048 GO:0005509
Dod02g1137 520 SMART efh_1 412 440 IPR002048 GO:0005509
Dod02g1137 520 ProSitePatterns EF-hand calcium-binding domain. 421 433 IPR018247 -
Dod02g1137 520 MobiDBLite consensus disorder prediction 1 35 - -
Dod02g1137 520 ProSiteProfiles Protein kinase domain profile. 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1137 520 Gene3D - 355 495 - -
Dod02g1137 520 SUPERFAMILY Protein kinase-like (PK-like) 69 340 IPR011009 -
Dod02g1137 520 Pfam EF-hand domain 449 475 IPR002048 GO:0005509
Dod02g1137 520 CDD STKc_CAMK 72 329 - -
Dod02g1137 520 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 15 40 495 - -
Dod02g1137 520 Pfam Protein kinase domain 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1137 520 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
Dod02g1137 520 ProSiteProfiles EF-hand calcium-binding domain profile. 408 443 IPR002048 GO:0005509
Dod02g1137 520 Pfam EF-hand domain pair 377 437 IPR002048 GO:0005509
Dod02g1137 520 SUPERFAMILY EF-hand 368 495 IPR011992 -
Dod02g1137 520 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Dod02g1137 520 SMART serkin_6 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1137 520 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Dod02g1137 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Dod02g1137 520 MobiDBLite consensus disorder prediction 1 64 - -
Dod02g1137 520 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Dod02g1137 520 Gene3D Phosphorylase Kinase; domain 1 74 157 - -
Dod02g1137 520 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1137 Dod-Chr2 14128462 14132889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1137 57 494 EF-hand Containing Proteins AT4G23650 82.916 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod02g1137 Pkinase 2.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1137 K13412 - gmx:100777096 862.062