Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1128 ATGGCGAGCGAGCTTGAGAACAGAGCGAAAGAGGCATTCTTCGACGACGACTTCGCTCTCGCCGTCGATCTTTACTCGGAAGCCATCCAGTTGGATCCCAGCAACCCCAATCTCTACGCCGACAGGGCCCAGGCCCATATCAAGCTCGCCTCCTTCACTGAAGCCGTTTCTGATGCAAGCAAAGCCATCCAGTTGGATCCCTCCTTACCCAAGGCCTACCTCCGCAAAGGCACCGCTTGCATTAAGCTCGAAGAGTATCACACTGCCAAAGTGGCACTGCAAAGTGGTGCCTCTATTCCGCCCAGTGATTCCAGATTCGCCACCTTGATTCAGGAATGTGATCACCACATTGCAGAGGAATCAAACGTTGTTGCTACCACCTTGTCAGCAACTGGGCTCAAAACGTCTGTGCCTACTGGTAACAGTTCCAATCCAAATGATACAAGTACTGGGACAAATAAAGAAGCTGAAACAGACAGTTCTTTATCCCAAATCAGTGATGGTGCATCAGCCAGACCAAAATATAGACATGAATATTACCAGAAGCCAGACGAAGTGGTTGTGACTATATTTGCAAAAGGAATACCAGCAGACAATGTGGTTGTTGACTTTGGTGAACAGATTCTGAGTGTTACTATTGATGTTCCTGGGCAAGAACCCTATCATTATCAACCTCGATTGTTTGGAAAGATAATACCTGCTAAGTGCAGAGTTGTGGTGTTGTCAACTAAAGTTGAAATCCGTCTTGCAAAAGCTGAAGCTATTAATTGGACATCTCTGGAATATAGCAAGGATATGCTTCCCCAAAAAATAAGTATGCTGACAGTTCAACCTGAAAGGCCTTCATACCCATCATCAAAGCCAAGGACAAAAGATTGGGATAAGTTGGAAGCTCTAGTGAAAAAAGAGGAGAAAGAAGAGAAGCTTGATGGTGATGCTGCTTTGAATAAATTGTTCCGTGATATTTACCAAAATGCAGATGAGGACATGAGGAGAGCAATGAGCAAGTCTTTTTTGGAGTCAAATGGAACAGTGCTGTCAACCGACTGGAAAGAAGTAGGATCAAAGAAGGTGGAAAGCAGTCCTCCAGAAGGTATGGAGTTGAGGAAATGGGAGTATTGA 1122 0.4519 MASELENRAKEAFFDDDFALAVDLYSEAIQLDPSNPNLYADRAQAHIKLASFTEAVSDASKAIQLDPSLPKAYLRKGTACIKLEEYHTAKVALQSGASIPPSDSRFATLIQECDHHIAEESNVVATTLSATGLKTSVPTGNSSNPNDTSTGTNKEAETDSSLSQISDGASARPKYRHEYYQKPDEVVVTIFAKGIPADNVVVDFGEQILSVTIDVPGQEPYHYQPRLFGKIIPAKCRVVVLSTKVEIRLAKAEAINWTSLEYSKDMLPQKISMLTVQPERPSYPSSKPRTKDWDKLEALVKKEEKEEKLDGDAALNKLFRDIYQNADEDMRRAMSKSFLESNGTVLSTDWKEVGSKKVESSPPEGMELRKWEY* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1128 373 MobiDBLite consensus disorder prediction 351 373 - -
Dod02g1128 373 SUPERFAMILY TPR-like 2 113 IPR011990 GO:0005515
Dod02g1128 373 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Dod02g1128 373 SUPERFAMILY HSP20-like chaperones 168 267 IPR008978 -
Dod02g1128 373 ProSiteProfiles SGS domain profile. 282 373 IPR007699 -
Dod02g1128 373 Pfam SGS domain 291 371 IPR007699 -
Dod02g1128 373 ProSiteProfiles CS domain profile. 172 261 IPR007052 -
Dod02g1128 373 SMART tpr_5 2 35 IPR019734 GO:0005515
Dod02g1128 373 SMART tpr_5 36 69 IPR019734 GO:0005515
Dod02g1128 373 SMART tpr_5 70 103 IPR019734 GO:0005515
Dod02g1128 373 Pfam Tetratricopeptide repeat 38 68 IPR019734 GO:0005515
Dod02g1128 373 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Dod02g1128 373 PANTHER PROTEIN SGT1 HOMOLOG A 1 373 - -
Dod02g1128 373 Pfam CS domain 176 251 IPR007052 -
Dod02g1128 373 MobiDBLite consensus disorder prediction 134 170 - -
Dod02g1128 373 Gene3D - 173 264 IPR008978 -
Dod02g1128 373 CDD p23_CS_SGT1_like 178 261 - -
Dod02g1128 373 Gene3D Tetratricopeptide repeat domain 1 125 IPR011990 GO:0005515
Dod02g1128 373 MobiDBLite consensus disorder prediction 134 168 - -
Dod02g1128 373 MobiDBLite consensus disorder prediction 352 373 - -
Dod02g1128 373 PANTHER PROTEIN SGT1 HOMOLOG 1 373 IPR044563 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1128 Dod-Chr2 14000570 14005618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1128 1 112 U-box Gene Family AT3G07370 29.464 6.23e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1128 K12795 - gmx:100784022 541.191