Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1120 ATGATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGAGGGAGTCTGCTTTGCAAAGAAGGATTTCAACCTGGCAAAGCACCCTGAGATCGATGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCGAAGGAGTACGTGAGGGAGACCTTTGCCTGGATGCACTATTACTGGTTCCTCACCAATGATGGCATTGAACACCTCAGGACTTACCTCAACCTTCCTTCTGAGATCGTCCCAGCCACCCTCAAGAAGCAGGCCAAGCCAGCTGGCAGACCATTCGGTGGTGGCCCACCCGGTGACCGCCCTAGGGGTCCTCCTCGCTTTGATGGAGAAAGGAGATTTGGTGACCGTGATGGATACCGTGGAGGTCCCCGTGGCCCTGGCGGTGACTTTGGAGGAGACAAGGGTGGAGCTCCTGCTGACTACAGACCTTCTTTTGGTGTATGTCTTATTGCCTCATTGTTATATTTGAAGTTGAGATTGTGTTCATCTTTATTTATATTTTATATTTTGTATTTGCGTGCCACGATTATGTATTATTTGTCTTTTATTATGTGA 585 0.4803 MIIPEKNRKEICKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKPAGRPFGGGPPGDRPRGPPRFDGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGVCLIASLLYLKLRLCSSLFIFYILYLRATIMYYLSFIM* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1120 194 Pfam Plectin/S10 domain 3 94 IPR005326 -
Dod02g1120 194 Gene3D - 1 104 IPR036388 -
Dod02g1120 194 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 156 - -
Dod02g1120 194 MobiDBLite consensus disorder prediction 113 129 - -
Dod02g1120 194 MobiDBLite consensus disorder prediction 95 143 - -
Dod02g1120 194 PANTHER 40S RIBOSOMAL PROTEIN S10 1 156 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1120 Dod-Chr2 13909109 13910699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1120 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 82.051 6.61e-73 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1120 K02947 - gmx:100500445 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1120 02 13909109 13910699 Dod04g2765 04 51595108 51598299 PCT