Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1108 ATGTCTTCTGCTAATATTTATGGTCTTGATGTTTCTATCCACAGACATTCAAGCTCAGACATGTTGTTCTCCTATGATGAAAGCCGAGACCTTCTGGTTTTCTCTGACCCTTTCCCTTTTCCTTTCTTCACAGACTCTCCCATTGATATAGCTCAGAACAATTCTCTTGACCCGTTTTCCCTTTCTTTCTTCTCTTTTTCTCCTTCGAATTATACCCACTTGGACAGCCAGAGTCTTTATCAGGGTAACCATGAACAACCTCTACCAAATGGTCCAAATTTAGAGAGCGAGTTCACAAAATTATTCTCTGCTTTGAATGGGTCTGAAGTGAAAAGTGAGGAATGCCAAATGGGTGGTGGTGTTGTCGACAATAACTACAATCACCACCAAGCTCCTCACAGTGACAGTGGTGCTGAAAGTGTATCAAATGTCATGCAGAGGAGCAACAGCTGTAACTCTTTCGATGGGATTGGGAACCCTGGTTTTCTACTTGAAGCTCACCGCAATACTCTCATGGACTCCCCAGATTTTCAATGGCATGCCTTGAGCTCCCCCGAAAATAGTTTCTTCACTGGGCAATTAAGGAGGGTGTTCAGTGCAGGAGATTTGCAGAACACAAAAGTAGCTCTTGCGTCTCAAACTCAAAGTGAGAGCACGTTAAGGGAGGAGGCAAATTTCAAGGTAGGGCGTTACAGTGCCGAGGAACGAAAAGAGAAAATCTCCAAGTATAGGGCCAAGAGAAGCCAGAGGAAGTTCAACAAGACTATCAAGTATGCATGCCGAAAGACACTAGCAGACAATCGAGCGCGCATACGTGGCAGATTCGCACGCAATGACGAAACCAGCAGCGTGATTCCAAAAGATTCATGGTCAGCCAAAGACGAAGATCATCGCGAAGACGAATTCTGGATTGACCTGGTTGAAGGGTTAAATGACGAGGTCCTAAGTTAG 951 0.4479 MSSANIYGLDVSIHRHSSSDMLFSYDESRDLLVFSDPFPFPFFTDSPIDIAQNNSLDPFSLSFFSFSPSNYTHLDSQSLYQGNHEQPLPNGPNLESEFTKLFSALNGSEVKSEECQMGGGVVDNNYNHHQAPHSDSGAESVSNVMQRSNSCNSFDGIGNPGFLLEAHRNTLMDSPDFQWHALSSPENSFFTGQLRRVFSAGDLQNTKVALASQTQSESTLREEANFKVGRYSAEERKEKISKYRAKRSQRKFNKTIKYACRKTLADNRARIRGRFARNDETSSVIPKDSWSAKDEDHREDEFWIDLVEGLNDEVLS* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1108 316 Pfam CCT motif 236 278 IPR010402 GO:0005515
Dod02g1108 316 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 46 313 IPR045281 GO:0009909
Dod02g1108 316 ProSiteProfiles CCT domain profile. 236 278 IPR010402 GO:0005515
Dod02g1108 316 PANTHER CCT MOTIF FAMILY PROTEIN 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1108 Dod-Chr2 13762305 13764421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1108 232 281 C2C2-CO-like Transcription Factor Family AT5G57660 52.000 2.28e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod02g1108 CCT 2.9e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1108 - - gmx:100786853 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1108 02 13762305 13764421 Dod04g2755 04 51474318 51475806 PCT