Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1101 ATGGAGAAGGAGGAAGATGTGAAGGTTGGAGCAAACAAGTTCTCAGAGAGGCAGGCACTGGGGACAGGAGCACAGAGTGACAAGGACTACAAGGAGGCACCACCAGCACCCTTGTTTGAGGCAGGGGAACTCAAGTCATGGTCCTTCTACAGGGCTGGCATTGCTGAGTTTGTGGCCACCTTCTTGTTCCTCTACATCTCTGTCTTGACTGTCATGGGTGTCAACAGGTCACCCTCCAAGTGTTCCACTGTTGGCATCCAAGGCATTGCTTGGTCTTTTGGTGGCATGATCTTTGCCCTTGTCTACTGCACTGCTGGGATCTCAGGTGGACATATCAATCCAGCAGTGACCTTCGGTTTGTTTTTGGCTAGGAAGTTGTCCCTCACAAGAGCCCTATTCTACATTATCATGCAGTGTCTTGGAGCCATCTGTGGTGCGGGTGTGGTGAAGGGCTTTGAGGGTAATGCACGCTATGAGTTGTACAAAGGTGGAGCCAACTATGTGAGCCATGGATACACCAAGGGTGATGGCCTTGGAGCTGAGATTGTTGGCACCTTTGTTCTTGTCTACACTGTCTTCTCTGCCACTGATGCCAAGAGAAACGCCAGAGACTCCCACGTTCCTATTTTGGCACCTCTTCCCATCGGGTTCGCTGTGTTCTTGGTCCATTTGGCCACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGTGCTGCCATCATCTTCAACAGAGACCTTGCATGGGATGACCATTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCCCTTGCTGCAGTATATCACCAGTTAGTGATCCGAGCAATTCCTTTCAAGACAAGGGGTTAA 861 0.5064 MEKEEDVKVGANKFSERQALGTGAQSDKDYKEAPPAPLFEAGELKSWSFYRAGIAEFVATFLFLYISVLTVMGVNRSPSKCSTVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAICGAGVVKGFEGNARYELYKGGANYVSHGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNRDLAWDDHWIFWVGPFIGAALAAVYHQLVIRAIPFKTRG* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1101 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 3 285 IPR034294 -
Dod02g1101 286 TIGRFAM MIP: MIP family channel proteins 55 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod02g1101 286 MobiDBLite consensus disorder prediction 1 31 - -
Dod02g1101 286 CDD MIP 51 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod02g1101 286 Gene3D Glycerol uptake facilitator protein. 36 284 IPR023271 -
Dod02g1101 286 PRINTS Major intrinsic protein family signature 130 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod02g1101 286 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod02g1101 286 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod02g1101 286 PRINTS Major intrinsic protein family signature 93 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod02g1101 286 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod02g1101 286 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod02g1101 286 PANTHER AQUAPORIN PIP1-6 3 285 - -
Dod02g1101 286 Pfam Major intrinsic protein 43 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod02g1101 286 SUPERFAMILY Aquaporin-like 43 278 IPR023271 -
Dod02g1101 286 ProSitePatterns MIP family signature. 111 119 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1101 Dod-Chr2 13666756 13669191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1101 3 285 Major Intrinsic Protein MIP AT3G61430 85.159 1.93e-174 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1101 K09872 - gmx:100796833 556.599