Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1099 ATGGTACTGCCAGAGAAACTGAAGAAACAGCTTGCTTTAGCCGTGAGAAGCATTCATTGGAGCTACGGAATCTTTTGGTCTGGCTCAGCCACCCAACCCGGGGTCTTGAGTTGGGGTGAAGGATACTACAATGGAGATATTAAGACTAGAAAGACAAGTCAAGTGGTAGAACAAAATTCTGAGGATATAGGCTTGCAGAGGAGTGAGCAGCTGCGAGAGCTATATGCATTCCTCACAATTGCAGATGCCAGCTCACAAACCAAAAGGCCATCGGCTGCACTTTCCCCTGAAGATCTCACAGATGCTGAGTGGTTCTACTTGGTTTGCATGTCCTTTGTATTCAACATTGGCCAAGGTTTACCAGGAAGAACTCTGGCGAATGGCCAACCGGTTTGGCTGTGCAATGCTCATTCTCCTGATAATAGAGTTTTTTGTCGCTCTCTACTTGCAAGGAAATATAATAAACTGTATAATTCAAGTTTTCTTCATCTCAACTTTCAGACAGTGGTGTGCTTTCCTTTTCTGGAAGGGGTTATTGAGCTAGGAACGACTGATCTGGTTTCTGAAGATCAGAGTCTAATTCAACGGATCAGAACTTGTTTCTTGGATATTCTGGAAAGCAATGTTCCCAATGAGTCAGGGGCTACTTTGAACTCGAGAAACAATGAAGGTGGCGCATGTACAGCATTTGATCAGAATGCTTACGGTCTTAAATTGACTCCAGAAGTAGTAGGATATGAACTAATCAATATAACTTCTCCGAATAGTAGTTCAAATGCATTACAATCCAATCAACCAGCAGATGGAACATTCATTGGTGAAAGGATAAATGGCAGCGCCTCTAAAGTCCAAAGCTGGCAAGTTATGGATGATGAATTGAGCAACTGTGTCCATAATAACTCCATGAATTCCAGTGACTGTTTATCTCAAACTTTGGCCAGTCCTGAGAAGATTGCTTTTGTTCCCAGTGCTGAACAAGACTTTCAAGAATGCAAAACAACTTTAGAAGATCTTCAAAGTGACGATAAGCATTATCATAGGCTACTTTCTGCCCTTCTAAAACGCACTGACCAGTTAATTATGGGGGTGCATTTTCCAGATTTTCGTCAGGAATCAAGCTTTGTCGTTTGGAAGCAACAAGGACCAAAGGGTTGTCAAATGTCAAGAGGAGGAGCCCCACAAAAATTATTGAGGAAGGTATTGTTTGAAGTTCCTCGGATGCACATGGATGGGTTGCTTGAGTCTCAAGAAGATTGTAAAGAGGGAATGAGTCCAGATGCAGATGAAATCGGCATGAACCACATCTCGTCAGAAAGAAGGAGAAGAGCAAAACTAAATGAAAGGTTTTCAACCCTTAGATCAATGGTCCCTATAATTAGTAAGGATGACAAAGTTTCAATACTAGATGATGCGATAGAATACCTTAGAAAGCTTGAGAAAAAGGTAAGAGAGTTGGAAGCTCAAAGAGAGTTAATAGAGTTAGACACCGAAACTAAAAGAACACCTCAAGATATGGTGGAGAGGACCTCTGGTAATTACTGCAACAACAAAATAGATAATGGCAAGAAGTCAGTGTCAAATAAGAGGAAGGCTTGTGAAGCTGAAGAGACTGGGCGAGAGATCAGTTCAGAGGCTCTAAAAGAAAGTTCCAACATTAATGTTACTATCTGCATGAATGACACTGAGGTTCTGATTGAAATGAAGTGCCCTTGGAGAGAAGGAGTGCTGCTGGAAACTGTGGAAGCACTCAGCAGCCTACATTTAGATTGTCATTCAGTTCAGTCATCAGAAGATGATGGTAGTCTCTATTTGACCATCAAATCTAAGTTCAGAGGATCAACAGTTGCATCAGCAAAAAGGATCAGACACACACTTCAGAAAGCGGCTTCAAAGTGTTGA 1899 0.4171 MVLPEKLKKQLALAVRSIHWSYGIFWSGSATQPGVLSWGEGYYNGDIKTRKTSQVVEQNSEDIGLQRSEQLRELYAFLTIADASSQTKRPSAALSPEDLTDAEWFYLVCMSFVFNIGQGLPGRTLANGQPVWLCNAHSPDNRVFCRSLLARKYNKLYNSSFLHLNFQTVVCFPFLEGVIELGTTDLVSEDQSLIQRIRTCFLDILESNVPNESGATLNSRNNEGGACTAFDQNAYGLKLTPEVVGYELINITSPNSSSNALQSNQPADGTFIGERINGSASKVQSWQVMDDELSNCVHNNSMNSSDCLSQTLASPEKIAFVPSAEQDFQECKTTLEDLQSDDKHYHRLLSALLKRTDQLIMGVHFPDFRQESSFVVWKQQGPKGCQMSRGGAPQKLLRKVLFEVPRMHMDGLLESQEDCKEGMSPDADEIGMNHISSERRRRAKLNERFSTLRSMVPIISKDDKVSILDDAIEYLRKLEKKVRELEAQRELIELDTETKRTPQDMVERTSGNYCNNKIDNGKKSVSNKRKACEAEETGREISSEALKESSNINVTICMNDTEVLIEMKCPWREGVLLETVEALSSLHLDCHSVQSSEDDGSLYLTIKSKFRGSTVASAKRIRHTLQKAASKC* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1099 632 SMART finulus 435 484 IPR011598 GO:0046983
Dod02g1099 632 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 429 478 IPR011598 GO:0046983
Dod02g1099 632 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 431 494 IPR036638 GO:0046983
Dod02g1099 632 PANTHER TRANSCRIPTION FACTOR EGL1 6 628 - -
Dod02g1099 632 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 201 IPR025610 -
Dod02g1099 632 Coils Coil 468 495 - -
Dod02g1099 632 Gene3D - 428 495 IPR036638 GO:0046983
Dod02g1099 632 PANTHER TRANSCRIPTION FACTOR TT8 6 628 - -
Dod02g1099 632 Pfam Helix-loop-helix DNA-binding domain 433 479 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1099 Dod-Chr2 13645919 13649318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1099 3 632 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 45.796 3.76e-178 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod02g1099 bHLH-MYC_N 8.7e-49 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1099 - - gmx:100808167 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1099 02 13645919 13649318 Dod02g1099 02 13645919 13649318 ECH