Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1092 ATGGGGAAGGGTAGACCTAGGGCTGTTGAGAAGGGTGTTGTTGGGACGAGTCTCACTGTTCCCTCCTGCGGGTCCACCGGTATACCCGCAGGCCCTGTGTATTACCCTACCGACGATGAGTTCAAGGATCCCTTAGAGTATATCTACAAGATTAGGCCCGAGGCTGAGCCCTTTGGGATTTGTAGGATTGTCCCCCCTAAGGGTTGGAACCCTCCTTTTGCTTTGGATCTAGATAGTTTCACTTTCGCTACGAAGACACAGGCCATTCACAAGCTTCAGGCTCGTCCTCCTGCTTGTGACTCCAAGACCTTTGAGTTGGAGTACTCTAGGTTCTTGCAGGGTCACTGTGGGAAGAAGAACAAGAAGAGGGTTGTGTTTGAAGGGGAGGATTTGGACCTGTGTAAGTTGTTCAATGCGGTTAAGCGGTTCGGAGGGTATGATAAGGTTGTCGATGGGAAGAAGTGGGGGGATGTTGCTAGGTTTTTGAGGCCGGCGGGTAAGGTTTCGGACTGTGCTAAGCATGTGTTGTGTCAATTGTACCGCGAACATTTGTATGGTTATGAGGAATTTTATAATAGGATGAATCAGGGGACAGCGAGGAGTTGTAGGAAGGGGGAGCGAGGAGAGGAGGGGAAGGGTGATCGTCATGGGGTGCAGTCTTTGGGGTCCAAGAGACATCCAAGGAGTGTTAGTGGTTTGAAGGTTAAGGAATGTAAGGTTCGCGTGGAGGAAGAGCATGATCAGATTTGCGAGCAATGCAAAAGTGGCTTGCATGGGGAAGTCATGCTTTTGTGCGATAGGTGTGATAAGGGGTGGCATATTTATTGTCTATCCCCGCCATTAAAGCAAATTCCCCAGGGGAACTGGTATTGTTTCAGCTGCTTGAATTCTGATAGGGACAGCTTTGGTTTTGTGCCTGGTAAGCAGTATTCCCTGGAGGCTTTTAGACGAATGGCTGACCGGTCAAGTAAGAGATGGTTTGGGACGGGACCTGTTTCAAGGGTGCAGATAGAGAAAAAATTTTGGGAGATTGTAGAGGGATCGGTTGGTGAGGTTGAGGTTATGTATGGAAATGACTTGGACACCTCTGTCTATGGGAGTGGATTCCCACGTGTTACTGATCAGAAACCACAATCTATTGATGACGAGTTATGGCATGAATACTCGACAAACCCATGGAATCTTAATAACTTGCCAAAGTTGAAAGGATCAATGCTTCGAGCTGTTCATCACAATATCACTGGTGTCATGGTACCCTGGCTGTATATTGGGATGCTATTCTCATCCTTTTGCTGGCATTTTGAGGATCACTGCTTTTACTCGATGAATTATCTACACTGGGGAGAGCCAAAGTGCTGGTACAGTGTTCCTGGCAGTAAAGCCAGTGCTTTTGAGAAGGTGATGAGAAACTGTCTTCCTGATCTTTTTGATGCACAGCCTGACTTACTTTTTCAGCTTGTTACTATGTTAAACCCATCTGTCTTGCAAGAAAATGGAGTTCCTGTCTACAGCGTACTTCAGGAGCCTGGGAATTTTGTTATAACCTTCCCCAGATCTTATCATGGAGGTTTTAATCTTGGCTTAAATTGTGCGGAGGCAGTCAATTTTGCTCCAGCTGACTGGCTACCATTTGGTGCATTTGGTGCTGAGCTCTATCAGCGGTATCACAAACCTGCTGTCTTGTCTCATGAGGAGCTTCTTTGTGTAGTAGCAAAGTATGGTGATGTTGATAGCAGAGTATCTTCTTATTTGAAGAAGGAACTGTTGAGAATATTGGATAAAGAAAAGTCTTGGAGAGAGAAACTGTGGAAAAATGGTATAGTTAAGTCTTCTTGGTTGGCTCCTCGAGAATGTCCACAATATGTGGGAACTGAGGAGGATCAAACATGCATAATTTGCCAGCAATATCTCTATCTCTCTGCTGTTGTGTGCAGTTGCAGGCCATCGTCATTTGTGTGCCTTGAGCACTGGGAACACCTTTGTGAGTGCAAAACTGTAAAACAATGCCTTCTCTACCGTTACTCACTTGCAGAATTGTTTGATTTGGCATTTTCTATGGACAAATATACTTCTGAAGACAAGGCTGAGTGTAAAAGTGTTAGAAGGCAATCATCATGTCAGGGTGCTTTGACCAAAAAGGTGAATGGTGGCTTCGTTGTTTTCAACCAACTAGCTACAGAATGGCTTCTGCAATCCAGGACGATTCTTCAGGATACTTTCTCAAGTGATGCATTTGTTACAGCATTAAGGAAAGCTGAACAGTTTCTTTGGGCTGGTTCTGAGATGGACTCTGTTCGGGATATGGTGAAGACTCTGATTGAAGCTCAGAAGTGGGCAGAAGGAATACGAGATTGTGTAAAAAAAATTGAGTCTTGGTATAAAGACTCAAGTGTAAAGAAAGTTCATTTAGAATTCATCAATGAATTACTGAGATTTAATCCTGCACCATGCAATGAGCCTCATTATCATAAATTGAAGGAATATGCAGAAGAAGCAAGATTGTTAGTTCAGGAGACTGATACTGCTTTGTCAATTTGTTCAAAGATGTCTGAGTTGGAAATTTTATACTCCAGAGCTTGTGGCTTACCCGTCTATGTAAAAGAGATCAAGAAATTAGAAGGGAAAATTTCTTCAGCTAAGACATGGCTGGATAGCGTTAGAAAGTGTATCTCAGCGAGATATCCTACTGTGTTAGATGTTAATGTTCTTTACAAATTAAAATCAGAGATTGTGGATCTTCGAGTTCATCTTCCAGAGATAGATTTGCTTCAGAATCTATTAATTCAAGCCGAATCTTGTAGTGTTCAATGTCGTGACATGTCAGAAGGTGCTATGAATCTCGAGAATGTTGGTATGCTGCTCAAGGAATGGGACAATTTTACAGTCGATGTACCAGAGTTGCAACTTCTAAGGCAATACCATTCAGATGCTGTTTCATGGGTTTCCCACTGTAATGATGTTTTAGGGAGAGTTCACGCGCAGGAAGATCAACCTAATGCAGTTAATGAATTGACGCACATTTTTGAAGAAGGTTTATCTTTAAAAATTCAAGTTGATGTATTGCCACTAGTTGAAATTGAGCTGAAGAAGGCTAAATGCCGGGAAAAGGCTTTGAAGGCACGTGATGTGAAAGTTCCTTTGGAATTCATTCAGCAGTTGTTGGAGGAGGCCACAAAGCTACAAATTGAGGGAGAGAAATTATTTGTCAATTTATCTCCCGTGCTTGCTCTTGCCATGCCTTGGGAGGAAAGGGCTAGAGAGATCCTTTCACAGGAGTCTCCTATTTCTGACTTTGAGGACTTGATTAGGGCTTCAGAAAACATATTTGTTATTCTTCCTTCACTCAATGATGTCAAGGATGCATTATCAGAAGCTAATTCCTGGTTAAGGAATTCAAAGCCATATTTAGTCTCTTCTCCATGTGCTTCAAACTGTTTGCGGAGAGTTGAGGAATTGCAGATGTTGGTTTCTGAATCAAAGAGTCTTAAAATATCTTTGGAAGAAAGAAGTATGCTTGAATTAGTGTTGAAGAACTGCAAATTTTGGGAGTGTGAAGCATCTTCTCTACTTGATGATTCTTGTCGCTTTTTCAAATTGGATAACACTGTTGAAGGAATAAGCAGTGATTTGATGTTTAAAGTGGAAGATTTGATTACAAGAATCCAATCTGCCATAAGATCTGGTGTAACACTTGGTTTTGACTTTGAAGAGATTTCAAAACTTCAAGCATCTTGTTCTACACTGCAATGGTGCAAAAGAGCCCTTTCTTTTTGTGATTGTTCTCCTTCTTCAGAGGATGTTTTGGAGGTTGCAGAAGGCCTTTCTCATTGTTGTGTTTCTGGTGCGCTGTTGAAATTACTGGTTGACGGGGTTGAATGGCTTAAGAGAGCGCTGGAGGGGATATCTGGACCACATAATTCTAGAAGATGCAAGTTGACTGATGTTCAAGAAATTCTTAATGATTATCAGACTGTAGATATGACCTTTGCAGCTGTATACTGTCAACTTGAAGAAGCCATTAGAAAACATAAGTTGTGGCAAGAACAAGTGCAACAATTTTTTGGTCTAAATTATGGGGAACGATCTTGGTCATCAATATTGCAGCTCAAGGAACTTGGAGATGCTGTTGCCTTCAGTTGCTCAGAACTGAATTTGATTTTATCTGAATTTGATAAGGTGGAAAATTGGAAGAAAACATGCATCAAGAACATAGGAATTTCAGTCCAAAATGAAAACTCGCTGCATGATGTGCTTGAGAAGATAAAACAGAGTCTAGATAGATCATTGTCCATTTATGGCAAGATGCAAGATCGGAAGGAACAAGACCTATGCATCTGCTGCTTTGTTGATTCTGAAGATCAGGAATTCCTTACTTGTTCGACTTGTATGGACTGCTATCATTTGCAGTGCATCGGATTAACAGCAAAGGACACAGGCATTGAAAACTATAAGTGTCCTTACTGTGAAATTGTGAAGGGTGAATCTTCGAGTGGAGGTGGCCTCCTGAGGTTTGGGAAGAAGCGTATTGAATTGAAAGTTCTCATTGAACTTCTGTCTGATGCTGAACATTTCTGTTTAAGGATTGGTGAAAGGGATGTTCTGAAGCAATTAGTTGAGAAAGCCTGTGCATGCAAATCTTCATTGAGAGAAATAGTGGACTTTGCATCAGCTAATGTTGATGAAGATATTAAAGTCATCTCTGAAAATTTAACCAAGGCTTTAAAGGCTACCGAAGTGGCTGGTGTCTGTGATCAGCATGATAATTGTGACCTTGAGCTGGCTTTAGCAAAAAACTTGTGGAAAGTCCAAGTCAATAGATTGCTAAATGGTGTACAAAAGCCCACTATCCAAGAGATTCAGAAGCATCTGAATGAGGGTCTGGCCGTGGAAATATCACCTGAAGATCACTATATGCTGAAACTTACAAATGTGAATTGCTTGGGTTTGCAGTGGGCAGAACTAGCTAAAAAGGTGGCAAATGATTCGGGGGCACTCAGTTTAGATAAAGTTTTTGAACTTGTAGTTGAAGGCGAAGACTTGCCTGTTGATGTTGAGGAGGAACTCAGGATGTTAAGAGCTCGATGCATGCTTTATTGCATTTGTCGGAAGCCCTTTGATCAAAAAAGTATGATTGCGTGTGATCTTTGTAAGGAGTGGTATCACTTTGATTGCATGAAATTACCATGCACACAACAGGTCTACATTTGTCCTGCTTGTAACCCGTGTACAGAAGAATTGCCTACAAACCATGAGAGATTAACTAGTGCGAAATTTGTGGAGCCTAAAACCCCATCTCCGAGGCATACAAACCCTAGAAAGAAACAGAAGAGAGATGTACCCAATCTCAATTACAAGATGTTTGCAACAGGGGATCAGGAGGATAGTAGTAGTTTTAGGTATTCTAGTGGGATAGAATGTCTTCGGTGGCAAAATCAAAGGCCTTTTAGAAGAGCAGCTAAGAAACGTGTTGAGCTTAGAAGTCTTTCTCCATTTCTATGCACACAACGATGA 5511 0.4188 MGKGRPRAVEKGVVGTSLTVPSCGSTGIPAGPVYYPTDDEFKDPLEYIYKIRPEAEPFGICRIVPPKGWNPPFALDLDSFTFATKTQAIHKLQARPPACDSKTFELEYSRFLQGHCGKKNKKRVVFEGEDLDLCKLFNAVKRFGGYDKVVDGKKWGDVARFLRPAGKVSDCAKHVLCQLYREHLYGYEEFYNRMNQGTARSCRKGERGEEGKGDRHGVQSLGSKRHPRSVSGLKVKECKVRVEEEHDQICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPQGNWYCFSCLNSDRDSFGFVPGKQYSLEAFRRMADRSSKRWFGTGPVSRVQIEKKFWEIVEGSVGEVEVMYGNDLDTSVYGSGFPRVTDQKPQSIDDELWHEYSTNPWNLNNLPKLKGSMLRAVHHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGSKASAFEKVMRNCLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYSVLQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADWLPFGAFGAELYQRYHKPAVLSHEELLCVVAKYGDVDSRVSSYLKKELLRILDKEKSWREKLWKNGIVKSSWLAPRECPQYVGTEEDQTCIICQQYLYLSAVVCSCRPSSFVCLEHWEHLCECKTVKQCLLYRYSLAELFDLAFSMDKYTSEDKAECKSVRRQSSCQGALTKKVNGGFVVFNQLATEWLLQSRTILQDTFSSDAFVTALRKAEQFLWAGSEMDSVRDMVKTLIEAQKWAEGIRDCVKKIESWYKDSSVKKVHLEFINELLRFNPAPCNEPHYHKLKEYAEEARLLVQETDTALSICSKMSELEILYSRACGLPVYVKEIKKLEGKISSAKTWLDSVRKCISARYPTVLDVNVLYKLKSEIVDLRVHLPEIDLLQNLLIQAESCSVQCRDMSEGAMNLENVGMLLKEWDNFTVDVPELQLLRQYHSDAVSWVSHCNDVLGRVHAQEDQPNAVNELTHIFEEGLSLKIQVDVLPLVEIELKKAKCREKALKARDVKVPLEFIQQLLEEATKLQIEGEKLFVNLSPVLALAMPWEERAREILSQESPISDFEDLIRASENIFVILPSLNDVKDALSEANSWLRNSKPYLVSSPCASNCLRRVEELQMLVSESKSLKISLEERSMLELVLKNCKFWECEASSLLDDSCRFFKLDNTVEGISSDLMFKVEDLITRIQSAIRSGVTLGFDFEEISKLQASCSTLQWCKRALSFCDCSPSSEDVLEVAEGLSHCCVSGALLKLLVDGVEWLKRALEGISGPHNSRRCKLTDVQEILNDYQTVDMTFAAVYCQLEEAIRKHKLWQEQVQQFFGLNYGERSWSSILQLKELGDAVAFSCSELNLILSEFDKVENWKKTCIKNIGISVQNENSLHDVLEKIKQSLDRSLSIYGKMQDRKEQDLCICCFVDSEDQEFLTCSTCMDCYHLQCIGLTAKDTGIENYKCPYCEIVKGESSSGGGLLRFGKKRIELKVLIELLSDAEHFCLRIGERDVLKQLVEKACACKSSLREIVDFASANVDEDIKVISENLTKALKATEVAGVCDQHDNCDLELALAKNLWKVQVNRLLNGVQKPTIQEIQKHLNEGLAVEISPEDHYMLKLTNVNCLGLQWAELAKKVANDSGALSLDKVFELVVEGEDLPVDVEEELRMLRARCMLYCICRKPFDQKSMIACDLCKEWYHFDCMKLPCTQQVYICPACNPCTEELPTNHERLTSAKFVEPKTPSPRHTNPRKKQKRDVPNLNYKMFATGDQEDSSSFRYSSGIECLRWQNQRPFRRAAKKRVELRSLSPFLCTQR* 1837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1092 1836 SUPERFAMILY FYVE/PHD zinc finger 1694 1747 IPR011011 -
Dod02g1092 1836 CDD PHD_RSF1 250 294 - -
Dod02g1092 1836 MobiDBLite consensus disorder prediction 202 221 - -
Dod02g1092 1836 SMART PHD_3 1443 1489 IPR001965 -
Dod02g1092 1836 SMART PHD_3 249 295 IPR001965 -
Dod02g1092 1836 SMART PHD_3 1698 1740 IPR001965 -
Dod02g1092 1836 Pfam PHD-finger 249 296 IPR019787 -
Dod02g1092 1836 Pfam C5HC2 zinc finger 630 679 IPR004198 -
Dod02g1092 1836 ProSitePatterns Zinc finger PHD-type signature. 250 294 IPR019786 -
Dod02g1092 1836 SUPERFAMILY Clavaminate synthase-like 343 568 - -
Dod02g1092 1836 SMART ARID_2 98 188 - -
Dod02g1092 1836 Pfam JmjC domain, hydroxylase 420 536 IPR003347 -
Dod02g1092 1836 Pfam jmjN domain 32 65 IPR003349 -
Dod02g1092 1836 ProSitePatterns Zinc finger PHD-type signature. 1699 1739 IPR019786 -
Dod02g1092 1836 Gene3D Cupin 236 558 - -
Dod02g1092 1836 ProSiteProfiles ARID domain profile. 98 192 IPR001606 GO:0003677
Dod02g1092 1836 SMART cupin_9 387 553 IPR003347 -
Dod02g1092 1836 Pfam PLU-1-like protein 1143 1399 IPR013637 -
Dod02g1092 1836 Pfam PLU-1-like protein 943 1198 IPR013637 -
Dod02g1092 1836 SMART bright_3 99 193 IPR001606 GO:0003677
Dod02g1092 1836 Gene3D Cupin 1693 1805 - -
Dod02g1092 1836 PANTHER LYSINE-SPECIFIC DEMETHYLASE LID 29 1020 - -
Dod02g1092 1836 SMART JmjN_1 30 71 IPR003349 -
Dod02g1092 1836 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1432 1499 IPR013083 -
Dod02g1092 1836 Pfam ARID/BRIGHT DNA binding domain 118 188 IPR001606 GO:0003677
Dod02g1092 1836 SUPERFAMILY FYVE/PHD zinc finger 1434 1489 IPR011011 -
Dod02g1092 1836 Gene3D Cupin 19 124 - -
Dod02g1092 1836 MobiDBLite consensus disorder prediction 202 228 - -
Dod02g1092 1836 ProSiteProfiles JmjN domain profile. 31 72 IPR003349 -
Dod02g1092 1836 ProSiteProfiles JmjC domain profile. 387 553 IPR003347 -
Dod02g1092 1836 ProSiteProfiles Zinc finger PHD-type profile. 247 297 IPR019787 -
Dod02g1092 1836 SUPERFAMILY FYVE/PHD zinc finger 235 295 IPR011011 -
Dod02g1092 1836 ProSitePatterns Zinc finger PHD-type signature. 1444 1488 IPR019786 -
Dod02g1092 1836 SUPERFAMILY ARID-like 81 198 IPR036431 GO:0003677
Dod02g1092 1836 MobiDBLite consensus disorder prediction 1754 1776 - -
Dod02g1092 1836 CDD ARID 100 188 - -
Dod02g1092 1836 PANTHER LYSINE-SPECIFIC DEMETHYLASE 29 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1092 Dod-Chr2 13592230 13612002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1092 31 95 JUMONJI Transcription Factor Family AT1G08620 52.174 5.39e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Dod02g1092 PLU-1 8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1092 K11446 - gmx:100789512 2995.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1092 02 13592230 13612002 Dod02g1092 02 13592230 13612002 ECH