Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1090 ATGGATGGGAGAGAAGCTATGGGATTCTCTGGTGGCTCGGCTTCATTCTACATACATAGAGGAGGAGGGGTTGGTGGGTCTGGAACACAACCAGGAGGGTTCCAAGGACCACCTGGGTTCAGGGCTTTGTCAAATGTGAGGGGTGGTGGTGGTGGCGCTGCAGCTGGTTCAACATTCTCAGTAGGAGAGTCCCATGGTGCCAATTTTAGTCATGGCATGAGTATAGGTTCCTCCTCTGCACCAGTTGGAGGAGGAGGAGGAGGAGGAGTAGTAGCTTCCTCTTCAGGGGAGCCTGTGAAGAGGAAAAGAGGGAGGCCCCGCAAGTATGGACCTGATGGACCTGTTTCTCTGAGGCTCTCTGCCACTGCTAATTCCTCCCCGGGATCAAGCACTCCGGCCGTGGAGAAGCGCCGGAGAGGTCGGCCCCCAGGAAGTGGGAGGAAGCAACAACTAGCCTCTCTAGGTGAATGGATGAACAGTTCTGCAGGACAGGCTTTCTCACCTCATGTTATAACCATTGAAGCTGGAGAGGACATCGTTGCAAAGTTATTGTCATTTTCACAGCAGAGACCAAGGGCTTTATGCATCTTATCAGGCACTGGAACAGTTTCTTCAGTAACTCTCTGTCAGCCTGCTTCTACTTTTGTTAGTGTCACTTACGAGGGCCGGTTTCAAATATTATGCTTGTCTGGTTCTTACTTGGTTGCTGAAGATGGTGGGCCTCGTAGTAGAACAGGTGGCATGAGCGTTTCCCTTTCTGGCCCTGATGGTCATGTTATTGGTGGTAGTGTTGCTACACTTATCGCAGCAAGCCCAGTGCAGGTGGTAGTATGCAGTTTTGTGTATGGTGGCTCTAAGTCCAAGACCAAGCCGGGAAAGGATGATAATAGCTCAGAGCCTCAGAGTAGTGATAAGTTAGCTTCACTAGCGAGTGCTCCTCCTCATCATTCTAATCAAAACTACAACTCTTCTTCTGCAACAGGTGGTATTTGGCCTGGTTCACGCCCAGCTGATCTCAAAAGTGCACATCCTCACACTGGTATTGACTTGACTCGTGGCTGA 1062 0.5066 MDGREAMGFSGGSASFYIHRGGGVGGSGTQPGGFQGPPGFRALSNVRGGGGGAAAGSTFSVGESHGANFSHGMSIGSSSAPVGGGGGGGVVASSSGEPVKRKRGRPRKYGPDGPVSLRLSATANSSPGSSTPAVEKRRRGRPPGSGRKQQLASLGEWMNSSAGQAFSPHVITIEAGEDIVAKLLSFSQQRPRALCILSGTGTVSSVTLCQPASTFVSVTYEGRFQILCLSGSYLVAEDGGPRSRTGGMSVSLSGPDGHVIGGSVATLIAASPVQVVVCSFVYGGSKSKTKPGKDDNSSEPQSSDKLASLASAPPHHSNQNYNSSSATGGIWPGSRPADLKSAHPHTGIDLTRG* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1090 353 MobiDBLite consensus disorder prediction 22 53 - -
Dod02g1090 353 CDD DUF296 168 280 IPR005175 -
Dod02g1090 353 ProSiteProfiles PPC domain profile profile. 163 301 IPR005175 -
Dod02g1090 353 SUPERFAMILY AF0104/ALDC/Ptd012-like 164 283 - -
Dod02g1090 353 MobiDBLite consensus disorder prediction 118 132 - -
Dod02g1090 353 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 353 IPR039605 GO:0003680
Dod02g1090 353 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 353 - -
Dod02g1090 353 Pfam Plants and Prokaryotes Conserved (PCC) domain 168 281 IPR005175 -
Dod02g1090 353 MobiDBLite consensus disorder prediction 287 353 - -
Dod02g1090 353 MobiDBLite consensus disorder prediction 78 151 - -
Dod02g1090 353 Gene3D - 168 293 - -
Dod02g1090 353 MobiDBLite consensus disorder prediction 301 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1090 Dod-Chr2 13579240 13583185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1090 1 353 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.869 2.13e-99 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1090 - - aip:107643074 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1090 02 13579240 13583185 Dod02g1090 02 13579240 13583185 ECH
Dod02g1090 02 13579240 13583185 Dod04g2729 04 51231468 51235128 PCT