Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1086 ATGATGATGGGTAGCATTAGCAATAAGTTTGAGAGTTGGGACTGCATTAATAGCTTGCAGTGCTGCGGGAACCTGTCGCCTCAGGCACACTACCCGTCGATGACAAGGTATCCGAGAGGGACGTCGCCGGAGGCAGCAAAGAAGGTGGTGGTGGAAGGATCAGAGGCGAAAGCGGTGTTTTGTGTGATGGGAATGACGTGTGCTGCGTGCGCCGGTTCAGTTGAGAAAGCCATCAAGCGCTTGCCTGGGATTCGAGAGGCCCTCGTTGATGTCTTGAATGACAAAGCCCTGGTTCTTTACTATCCTGCCATGGTTAACGAAGAGAGAATACGCGAGGCCATTGAAGATGCCGGATTTCAAGCCAGGCCTATTGAAGAAGAATCCATCGATCACTCCTCTCAAGTATGTCGAATACACATAAAGGGCATGACTTGTACTTCTTGCTCCTCCACTATTGAATCAGCTCTTCAATCCCTTCGTGGGGTCCACAAAGCTCAAGTGGCTTTGGCAACCGAAGAAGCACAAGTCAGCTATGACCCCAACATCATCGACTACGATAAGCTTAGGGAAACTATACAAGACACTGGCTTTGAATCAGTGCTAATAAGCACCGGTGAACACATAAGCAAGATAGAACTCAAAGTTGATGGCATCAAGAATGAACAATCCATTAATGCCATTGAGCAATCCCTCCAAGCAATCTCTGGTGTTGAAACCATAGACATATATCGTGACATTAACAAAGTTTCCATAGCTTATAAACCATACATGACAGGGCCTAGAACCTTCATTGAAGTCATAGAATCCACAGGTTCAGGATGCTTCAAAGCAGTGATATTCCCAAATGAAGCAGGAAGAGAGACACATAGACAGGAGGAAATCATGAGATACTTCAAGTTCTTCACATGGAGCTTGGTTTTCACCATTCCCGTGTTTCTAACATCCATGGTCCTTATGTATGTGCCTGGAGTTAAACATGTTCTAGATATCAAAGTTGTGAATATGCTGAATGTTGGACTGCTTTTGAGGTTGGAATTTGCTACCCCAGTGCAGTTTATCATAGGAAGGAGATTCTACATTGGGTCCTATAAAGCTTTGCGCAAAGGTTCTGCTAACATGGATGTGTTGATTGCCTTAGGAACAAATGCTGCCTACTTCTATTCTGTCTATGTTGTGGCAAGGGCTGCATTCTCTAAAGAATTCAAAGGCAATGAATTTTTTGATACCAGCTCTATGCTAATTTCGTTTATTCTACTAGGGAAGTATTTGGAGGTGTTGGCTAAGGGGAAGACATCACAGGCCATTGCTAAGCTTATGGACTTGACACCTGAGACAGCAATCCTGTTAACTCAAGATGATGAAGGAAATGTCATCAGCGAACAACAGATTGATGGCAGGTTGATACAAAAGAATGATGTGATCAAAGTTATTCCTGGTGCTAAAGTTGCATCGGATGGTTTTGTTATCTGGGGGCAAAGCCACATCAATGAGAGCATGATAACCGGAGAGGCGAGGCCTGTGGCGAAGAGGAAGGGTGATATGGTGATTGGAGGCACAGTGAATCAGAATGGGGTTTTGCATGTCAAGGTAACAAGGGTTGGATCAGAGAGTGCCCTCTCTCAGATTGTTCGCCTTGTTGAGTCTGCACAGATGGCTAAAGCTCCTGTCCAGAAGCTTGCAGATCACATTTCTAAATACTTTGTTCCTCTTGTCATAGTGCTTTCTATTTCAACTTGGCTTTCTTGGTTTTTAGCAGGGAAGTTGCATGCATACCCAAAATCATGGATTCCGTCCAACATGAACAGCTTTGAGCTTGCACTTCAGTTTGGGATTTCGGTCATGGTCATAGCTTGCCCCTGTGCTCTAGGCCTAGCCACTCCTACAGCTGTTATGGTTGGTACTGGAGTTGGTGCAACACAAGGTGTGTTGATCAAAGGGGGGCAAGCACTTGAAAGTGCACACAAGGTGAATTGCATTGTGTTTGATAAGACAGGTACTCTAACAGTTGGGAAGCCAGTAGTTGTTACTACAAAGCCCTTCAAAAACTTGTCACCTCAAGATTTCTACAAATTTGTTGCTGCAGCAGAGGTGAACAGTGAACATCCTATAGCCAAGGCCATTGTTGAGCACGCCAAGAAGATCATCACAGACGATGAACAGAATCATCCCTGGCCAGAAGCACGCGACTTTGTTTCTGTGTCAGGCCATGGAGTGAAGGCCATCATTCGAAACAAGGAAATATTGGTTGGGAACAAAAAATTGATGCTGGATCACAACATAGCCATTTCAGTTGATGCTGAAGAAATACTAGCAGAAGCTGAGAGCCTGGCTCAGACTGGGATTTTAGTATCCTTGGATGGAGAAATAGCTGGAGTTTTAGCAGTATCTGATCCGTTGAAACCTGATGCAAAAGAAGTCATTTCTATTCTCAAGTCCATGAAAATCAAGAGCATCATGGTGACAGGTGATAACGAGGGAACTGCCAATTCCATAGCCAGACAAGCTGGTATTGAAACTGTCATTGCAGAGGCCCAACCTGAGACTAAAGCCACTAAAGTAAAAGATTTGCAGAATTCTGGCTACACTGTGGCGATGGTGGGAGATGGCATCAACGACTCGCCAGCACTTGTGGCGGCCGATGTTGGAATGGCAATTGGTGCTGGGACAGACATAGCTATTGAGGCAGCTGACATAGTTCTCATGAGGAGCAACTTGGAGGATATAGTAACAGCCATTGACCTTGCAAAGAAAACTTTCTCCCGTATACGTCTCAACTACATTTGGGCACTGGGTTACAATCTTCTATCCATCCCAATTGCTGCTGGCATCCTTTACCCATCCACTAGATTCAGGTTGCCACCATGGATTGCTGGAGCTGCAATGGCTGCCTCTTCTGTCAGTGTTGTTTGCTCCTCCCTCTTGCTAAGGAATTACAAGAGGCCCAGAAAGCTAAACAACTTGAACATGAATGATATAAAGATTGAATGA 2988 0.4495 MMMGSISNKFESWDCINSLQCCGNLSPQAHYPSMTRYPRGTSPEAAKKVVVEGSEAKAVFCVMGMTCAACAGSVEKAIKRLPGIREALVDVLNDKALVLYYPAMVNEERIREAIEDAGFQARPIEEESIDHSSQVCRIHIKGMTCTSCSSTIESALQSLRGVHKAQVALATEEAQVSYDPNIIDYDKLRETIQDTGFESVLISTGEHISKIELKVDGIKNEQSINAIEQSLQAISGVETIDIYRDINKVSIAYKPYMTGPRTFIEVIESTGSGCFKAVIFPNEAGRETHRQEEIMRYFKFFTWSLVFTIPVFLTSMVLMYVPGVKHVLDIKVVNMLNVGLLLRLEFATPVQFIIGRRFYIGSYKALRKGSANMDVLIALGTNAAYFYSVYVVARAAFSKEFKGNEFFDTSSMLISFILLGKYLEVLAKGKTSQAIAKLMDLTPETAILLTQDDEGNVISEQQIDGRLIQKNDVIKVIPGAKVASDGFVIWGQSHINESMITGEARPVAKRKGDMVIGGTVNQNGVLHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADHISKYFVPLVIVLSISTWLSWFLAGKLHAYPKSWIPSNMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVTTKPFKNLSPQDFYKFVAAAEVNSEHPIAKAIVEHAKKIITDDEQNHPWPEARDFVSVSGHGVKAIIRNKEILVGNKKLMLDHNIAISVDAEEILAEAESLAQTGILVSLDGEIAGVLAVSDPLKPDAKEVISILKSMKIKSIMVTGDNEGTANSIARQAGIETVIAEAQPETKATKVKDLQNSGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMRSNLEDIVTAIDLAKKTFSRIRLNYIWALGYNLLSIPIAAGILYPSTRFRLPPWIAGAAMAASSVSVVCSSLLLRNYKRPRKLNNLNMNDIKIE* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1086 995 Gene3D - 52 122 - -
Dod02g1086 995 SUPERFAMILY HMA, heavy metal-associated domain 132 206 IPR036163 GO:0046872
Dod02g1086 995 ProSiteProfiles Heavy-metal-associated domain profile. 135 201 IPR006121 GO:0046872
Dod02g1086 995 Pfam haloacid dehalogenase-like hydrolase 656 880 - -
Dod02g1086 995 SUPERFAMILY HAD-like 659 972 IPR036412 -
Dod02g1086 995 SUPERFAMILY HMA, heavy metal-associated domain 52 128 IPR036163 GO:0046872
Dod02g1086 995 Gene3D - 627 923 IPR023214 -
Dod02g1086 995 TIGRFAM TIGR00003: copper ion binding protein 59 121 IPR006122 GO:0005507
Dod02g1086 995 TIGRFAM TIGR00003: copper ion binding protein 138 198 IPR006122 GO:0005507
Dod02g1086 995 SFLD C1.7: P-type atpase like 642 917 - -
Dod02g1086 995 Gene3D - 667 746 IPR023299 GO:0000166
Dod02g1086 995 Gene3D - 747 797 IPR023299 GO:0000166
Dod02g1086 995 ProSitePatterns E1-E2 ATPases phosphorylation site. 662 668 IPR018303 -
Dod02g1086 995 ProSitePatterns Heavy-metal-associated domain. 62 91 IPR017969 GO:0046872
Dod02g1086 995 ProSiteProfiles Heavy-metal-associated domain profile. 57 123 IPR006121 GO:0046872
Dod02g1086 995 Pfam Heavy-metal-associated domain 138 198 IPR006121 GO:0046872
Dod02g1086 995 Pfam Heavy-metal-associated domain 61 119 IPR006121 GO:0046872
Dod02g1086 995 Gene3D - 205 279 - -
Dod02g1086 995 ProSiteProfiles Heavy-metal-associated domain profile. 210 271 IPR006121 GO:0046872
Dod02g1086 995 PRINTS Copper-transporting ATPase 1 signature 57 82 - -
Dod02g1086 995 PRINTS Copper-transporting ATPase 1 signature 83 106 - -
Dod02g1086 995 PRINTS Copper-transporting ATPase 1 signature 158 179 - -
Dod02g1086 995 PRINTS Copper-transporting ATPase 1 signature 112 132 - -
Dod02g1086 995 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 25 986 - -
Dod02g1086 995 Pfam E1-E2 ATPase 442 638 - -
Dod02g1086 995 SFLD p-type atpase 642 917 IPR044492 -
Dod02g1086 995 SUPERFAMILY HMA, heavy metal-associated domain 205 274 IPR036163 GO:0046872
Dod02g1086 995 Gene3D - 428 550 - -
Dod02g1086 995 SUPERFAMILY Calcium ATPase, transmembrane domain M 412 652 IPR023298 -
Dod02g1086 995 CDD P-type_ATPase_Cu-like 301 962 - -
Dod02g1086 995 Gene3D - 133 204 - -
Dod02g1086 995 SUPERFAMILY Calcium ATPase, transduction domain A 461 546 IPR008250 -
Dod02g1086 995 CDD HMA 140 198 IPR006121 GO:0046872
Dod02g1086 995 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 413 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod02g1086 995 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 373 975 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod02g1086 995 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Dod02g1086 995 PRINTS P-type cation-transporting ATPase superfamily signature 496 510 - -
Dod02g1086 995 PRINTS P-type cation-transporting ATPase superfamily signature 660 674 - -
Dod02g1086 995 PRINTS P-type cation-transporting ATPase superfamily signature 791 802 - -
Dod02g1086 995 PRINTS P-type cation-transporting ATPase superfamily signature 813 823 - -
Dod02g1086 995 PRINTS P-type cation-transporting ATPase superfamily signature 889 901 - -
Dod02g1086 995 ProSitePatterns Heavy-metal-associated domain. 140 169 IPR017969 GO:0046872
Dod02g1086 995 CDD HMA 62 122 IPR006121 GO:0046872
Dod02g1086 995 PANTHER ATP7, ISOFORM B 25 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1086 Dod-Chr2 13563753 13571354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1086 56 995 Primary Pumps ATPases AT1G63440 72.775 0.0 1429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1086 K17686 - gmx:100817431 1565.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1086 02 13563753 13571354 Dod02g1086 02 13563753 13571354 ECH