Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1085 ATGAAGCCATGTACTTGTACTTCATTCTTGTTTCTCAGTTTTGTTTCCACGCTCTCTCTTGTGGCTTCTGATTCTCTGCCAGCAAATGAAGTTTGGGCACTTTCTAGTTTCAAAGAAGCTGTCTATGAAGACCCATTTATAGTTTTATCCAATTGGAATACCATAGATTCAGACCCTTGTAACTGGTTTGGCGTCTCATGCACTATGGCCAGAGATCATGTCATCAAGCTAAACATCTCAGGATCATCATTGAAGGGATTTGTTGCACCAGAGTTGGGGCAAATCACATACTTGCAAGAATTAATTTTGCATGGCAACAATCTTGTAGGAATAATACCAAAAGAGTTAGGCATGTTGAAGTCTCTCAAGGTGTTGGATTTGGGAATTAATCAGTTATCTGGACCAATTCCTCCGGAGTTTGGAAATTTAACTGAAGTTGTGCACATGAACCTGCAATCCAACGAGCTGACTGGCAGGCTACCGGCAGAACTTGGAAATTTGAAATACCTTCAAGAACTTCGGCTGGATAGGAATAAGCTTCAAGGACCTGTTCCTGGTGGTAGCAGCTCAAATTTGTCTTCAAATATGCATGGCATGTATGCCTCAAATGCGAATTTAACTGGCTTCTGTCGTTGGTCTCAGTTAAAAGTAGCAGACTTTTCATATAACTTTTTGGTTGGTAGTATACCCAAATGCTTGGAGTATCTTCCAAGTTCAAGCTTTCAAGGAAATTGCCTTCAGATTCAGAGCAAAGATGTAAAGCAGCGGCCTACCATTCAGTGTGCCGGTGCCTCACCTGCCAGGAGCCAGCCAGTGGTGGACCCGAACCACCGACCTACTGAATATGTGTCCAAGCATCATGGAGCATCAAAACCTGTTTGGCTTTTAGCTCTAGAAATAATAACGGGAACCATGGTTGGTTCTCTCTTTCTGGTTGCTGTTCTCGCTGCTTTGCAGAGGTGTAAGAAAAAAGCATCTGTCATTATTCCTTGGAAAAAATCTGCAAGCCAGAAAGACCATATGACAGTATATATAGACCCTGGGTTGTTGAAGGATGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGACAGTGTTGTGTACAAGGGAACCATGAAAGATGGGCCTGAGATTGCTGTAATCTCCATCTGCATCAAGGAGGAGCATTGGACCGGATATCTTGAACTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGAGAATACAGGAAAATTACTGGGCTATTGTAGAGAGAGCACTCCATTTACAAGGATGTTGGTTTTTGAGTATGCTTCAAATGGGACACTTCATGAGCACCTACATTGCTATGAAGAAGGATGCCAGTTCTCTTGGACACGGCGTATGAAAATTATTATAGGCATTGCACGCGGGCTCAAGTATTTGCACACAGAAATTGAGCCTCCATTCACTATTTCAGAGCTGAATTCTAGTGCTGTATATCTTACAGAAGATTTTTCCCCGAAGTTGGTTGATTTAGAAAGTTGGAAGACAATCCTTGAAAGATCAGAAAAGAATTCCGGTGCTATTGGCAGCCAAGGCGCTGTTTGCATTCTTCCAAATTCCCTCGAGGCACGCCATCTTGATGCCAAAGGAAACATATATGCTTTTGGGGTACTTCTACTGGAGATAATCAGTGGGAGACCTCCATACTGTAAGAACAAGGGGTACCTGGTGGATTGGGCCAAGGACTATCTTGAAATGCCGGAAGTGATGTCATATGTTGTGGATCCCGAATTGAAACATTTTAGATATGATGACCTCAAAGTGATATGTGAAGTAGTAACTCTTTGTATCAACCCTGATACCACGGCACGTCCATCTATGCGAGAAATATGTGGTATGCTGGAGAGCAGAATCGACACATCAATAAGCGCGGAGCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCGTGA 1998 0.4294 MKPCTCTSFLFLSFVSTLSLVASDSLPANEVWALSSFKEAVYEDPFIVLSNWNTIDSDPCNWFGVSCTMARDHVIKLNISGSSLKGFVAPELGQITYLQELILHGNNLVGIIPKELGMLKSLKVLDLGINQLSGPIPPEFGNLTEVVHMNLQSNELTGRLPAELGNLKYLQELRLDRNKLQGPVPGGSSSNLSSNMHGMYASNANLTGFCRWSQLKVADFSYNFLVGSIPKCLEYLPSSSFQGNCLQIQSKDVKQRPTIQCAGASPARSQPVVDPNHRPTEYVSKHHGASKPVWLLALEIITGTMVGSLFLVAVLAALQRCKKKASVIIPWKKSASQKDHMTVYIDPGLLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKDGPEIAVISICIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRESTPFTRMLVFEYASNGTLHEHLHCYEEGCQFSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSSAVYLTEDFSPKLVDLESWKTILERSEKNSGAIGSQGAVCILPNSLEARHLDAKGNIYAFGVLLLEIISGRPPYCKNKGYLVDWAKDYLEMPEVMSYVVDPELKHFRYDDLKVICEVVTLCINPDTTARPSMREICGMLESRIDTSISAELKSSSLAWAELALLS* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1085 665 Gene3D Ribonuclease Inhibitor 27 261 IPR032675 -
Dod02g1085 665 ProSiteProfiles Protein kinase domain profile. 366 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1085 665 Pfam Protein tyrosine and serine/threonine kinase 369 637 IPR001245 GO:0004672|GO:0006468
Dod02g1085 665 SUPERFAMILY Protein kinase-like (PK-like) 343 640 IPR011009 -
Dod02g1085 665 SUPERFAMILY L domain-like 28 238 - -
Dod02g1085 665 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Dod02g1085 665 Gene3D Phosphorylase Kinase; domain 1 340 447 - -
Dod02g1085 665 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Dod02g1085 665 PANTHER PROTEIN MALE DISCOVERER 2 8 663 - -
Dod02g1085 665 Gene3D Transferase(Phosphotransferase) domain 1 448 655 - -
Dod02g1085 665 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1085 Dod-Chr2 13549066 13554184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1085 48 644 Receptor kinase-like Gene Family AT5G45780 28.922 8.01e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dod02g1085 PK_Tyr_Ser-Thr 4.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1085 - - gmx:100794714 1127.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1085 02 13549066 13554184 Dod02g1085 02 13549066 13554184 ECH
Dod02g1085 02 13549066 13554184 Dod04g2703 04 50994428 50999481 PCT