Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod02g1085 | ATGAAGCCATGTACTTGTACTTCATTCTTGTTTCTCAGTTTTGTTTCCACGCTCTCTCTTGTGGCTTCTGATTCTCTGCCAGCAAATGAAGTTTGGGCACTTTCTAGTTTCAAAGAAGCTGTCTATGAAGACCCATTTATAGTTTTATCCAATTGGAATACCATAGATTCAGACCCTTGTAACTGGTTTGGCGTCTCATGCACTATGGCCAGAGATCATGTCATCAAGCTAAACATCTCAGGATCATCATTGAAGGGATTTGTTGCACCAGAGTTGGGGCAAATCACATACTTGCAAGAATTAATTTTGCATGGCAACAATCTTGTAGGAATAATACCAAAAGAGTTAGGCATGTTGAAGTCTCTCAAGGTGTTGGATTTGGGAATTAATCAGTTATCTGGACCAATTCCTCCGGAGTTTGGAAATTTAACTGAAGTTGTGCACATGAACCTGCAATCCAACGAGCTGACTGGCAGGCTACCGGCAGAACTTGGAAATTTGAAATACCTTCAAGAACTTCGGCTGGATAGGAATAAGCTTCAAGGACCTGTTCCTGGTGGTAGCAGCTCAAATTTGTCTTCAAATATGCATGGCATGTATGCCTCAAATGCGAATTTAACTGGCTTCTGTCGTTGGTCTCAGTTAAAAGTAGCAGACTTTTCATATAACTTTTTGGTTGGTAGTATACCCAAATGCTTGGAGTATCTTCCAAGTTCAAGCTTTCAAGGAAATTGCCTTCAGATTCAGAGCAAAGATGTAAAGCAGCGGCCTACCATTCAGTGTGCCGGTGCCTCACCTGCCAGGAGCCAGCCAGTGGTGGACCCGAACCACCGACCTACTGAATATGTGTCCAAGCATCATGGAGCATCAAAACCTGTTTGGCTTTTAGCTCTAGAAATAATAACGGGAACCATGGTTGGTTCTCTCTTTCTGGTTGCTGTTCTCGCTGCTTTGCAGAGGTGTAAGAAAAAAGCATCTGTCATTATTCCTTGGAAAAAATCTGCAAGCCAGAAAGACCATATGACAGTATATATAGACCCTGGGTTGTTGAAGGATGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGACAGTGTTGTGTACAAGGGAACCATGAAAGATGGGCCTGAGATTGCTGTAATCTCCATCTGCATCAAGGAGGAGCATTGGACCGGATATCTTGAACTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGAGAATACAGGAAAATTACTGGGCTATTGTAGAGAGAGCACTCCATTTACAAGGATGTTGGTTTTTGAGTATGCTTCAAATGGGACACTTCATGAGCACCTACATTGCTATGAAGAAGGATGCCAGTTCTCTTGGACACGGCGTATGAAAATTATTATAGGCATTGCACGCGGGCTCAAGTATTTGCACACAGAAATTGAGCCTCCATTCACTATTTCAGAGCTGAATTCTAGTGCTGTATATCTTACAGAAGATTTTTCCCCGAAGTTGGTTGATTTAGAAAGTTGGAAGACAATCCTTGAAAGATCAGAAAAGAATTCCGGTGCTATTGGCAGCCAAGGCGCTGTTTGCATTCTTCCAAATTCCCTCGAGGCACGCCATCTTGATGCCAAAGGAAACATATATGCTTTTGGGGTACTTCTACTGGAGATAATCAGTGGGAGACCTCCATACTGTAAGAACAAGGGGTACCTGGTGGATTGGGCCAAGGACTATCTTGAAATGCCGGAAGTGATGTCATATGTTGTGGATCCCGAATTGAAACATTTTAGATATGATGACCTCAAAGTGATATGTGAAGTAGTAACTCTTTGTATCAACCCTGATACCACGGCACGTCCATCTATGCGAGAAATATGTGGTATGCTGGAGAGCAGAATCGACACATCAATAAGCGCGGAGCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCGTGA | 1998 | 0.4294 | MKPCTCTSFLFLSFVSTLSLVASDSLPANEVWALSSFKEAVYEDPFIVLSNWNTIDSDPCNWFGVSCTMARDHVIKLNISGSSLKGFVAPELGQITYLQELILHGNNLVGIIPKELGMLKSLKVLDLGINQLSGPIPPEFGNLTEVVHMNLQSNELTGRLPAELGNLKYLQELRLDRNKLQGPVPGGSSSNLSSNMHGMYASNANLTGFCRWSQLKVADFSYNFLVGSIPKCLEYLPSSSFQGNCLQIQSKDVKQRPTIQCAGASPARSQPVVDPNHRPTEYVSKHHGASKPVWLLALEIITGTMVGSLFLVAVLAALQRCKKKASVIIPWKKSASQKDHMTVYIDPGLLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKDGPEIAVISICIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRESTPFTRMLVFEYASNGTLHEHLHCYEEGCQFSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSSAVYLTEDFSPKLVDLESWKTILERSEKNSGAIGSQGAVCILPNSLEARHLDAKGNIYAFGVLLLEIISGRPPYCKNKGYLVDWAKDYLEMPEVMSYVVDPELKHFRYDDLKVICEVVTLCINPDTTARPSMREICGMLESRIDTSISAELKSSSLAWAELALLS* | 666 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod02g1085 | 665 | Gene3D | Ribonuclease Inhibitor | 27 | 261 | IPR032675 | - | |
Dod02g1085 | 665 | ProSiteProfiles | Protein kinase domain profile. | 366 | 647 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod02g1085 | 665 | Pfam | Protein tyrosine and serine/threonine kinase | 369 | 637 | IPR001245 | GO:0004672|GO:0006468 | |
Dod02g1085 | 665 | SUPERFAMILY | Protein kinase-like (PK-like) | 343 | 640 | IPR011009 | - | |
Dod02g1085 | 665 | SUPERFAMILY | L domain-like | 28 | 238 | - | - | |
Dod02g1085 | 665 | Pfam | Leucine rich repeat | 97 | 156 | IPR001611 | GO:0005515 | |
Dod02g1085 | 665 | Gene3D | Phosphorylase Kinase; domain 1 | 340 | 447 | - | - | |
Dod02g1085 | 665 | Pfam | Leucine rich repeat N-terminal domain | 29 | 67 | IPR013210 | - | |
Dod02g1085 | 665 | PANTHER | PROTEIN MALE DISCOVERER 2 | 8 | 663 | - | - | |
Dod02g1085 | 665 | Gene3D | Transferase(Phosphotransferase) domain 1 | 448 | 655 | - | - | |
Dod02g1085 | 665 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 8 | 663 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod02g1085 | Dod-Chr2 | 13549066 | 13554184 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod02g1085 | 48 | 644 | Receptor kinase-like Gene Family | AT5G45780 | 28.922 | 8.01e-56 | 197 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Dod02g1085 | PK_Tyr_Ser-Thr | 4.2e-19 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod02g1085 | - | - | gmx:100794714 | 1127.08 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod02g1085 | 02 | 13549066 | 13554184 | Dod02g1085 | 02 | 13549066 | 13554184 | ECH | |
Dod02g1085 | 02 | 13549066 | 13554184 | Dod04g2703 | 04 | 50994428 | 50999481 | PCT |