Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1072 ATGTTTGAGTTTAAAAAGGAGCTCGAGGATTTCGGCTTTGATTCACCTCAACGAGATGTTTTCCATTTATGTCTTTCTTCGCCCAATTGCAATTGTGACACCACCATGCTGAAACCAACCCCTGTTGCAGGGAGTAACAAAGCTCAAGCTAGACGCTGGACAGAGGAAGAGGACAACCTTTTGATTGAGACTGTCAAGAAGCATGAAGCAAGGAACTGGAGGAAAACAGCTGCATACCTTCCTGGGCGAACTGATGTCCAGTGTTTGCATCGCTGGCAGAAGGTGCTGAATCCTGATCTTGTAAAGGGATCATGGACAAAGGAGGAGGATGATTGCCTCACTGAGCTAGTCAGAAGGTATGGTTTGAAGAGTTGGTCTGAAATAGCAAAATTCTTACCAGGTCGTATTGGGAAGCAATGCCGAGAGAGGTGGCACAATCACCTTGATCCAGCAATAAGGAAAGATGCCTGGACGGAGGAGGAGGAATCAGCACTTGCTCACTATTACCAAATATTCGGCAGTAAGTGGGCAGAGATTGCAAGGCATCTTCCTGGAAGGACCGACAATGCTATAAAAAATCATTGGAACTGCTCAATGAAGAAGAAAATGGATGCATTCTCCTCCCCTTTAGGTTGTGACATGAATGTGGCCACTTCCAGTTTATGCGCTCCTCGAATAAAGCCAACATATGTTACAGTTAATGCAGAGGGTCAAAGTTTCAATGAAATGGTTCCCCTAAATCAGAGTCACTGGTTGACGCATAGTGTTCATAACTTACCAACAAATTTGATTCTTCAGAATCGTTCGGGAGAGGAATTTTGCTCTGAAGTAAGCTGTTTTGAGGGGACAACTCCGATTAAACCCATAGCCTCGTCTTTGGACAATTCTCTCCATATGTTTGCTACTAATTGTGTTTATTTCCCTCCTGCCACTAGGAAGGCCTGTAAATCTCCCAAACGGCAGAGGGTTTTTTCGTCTGATGAATCTGACACTGACAGTCCCCATTGGGGATCCTCAAAATCAGCTGATTTTGAGACGGTCGGTCAAGTTAGAAATGAAAACAATATAAAAAACGACAGTATCTCGCATAATGCGGACAGTAGAGGTGGTAGTTATACTCCCCCAATCCCTGAACTCAGGAATCACATCGGCAGCATCCGTCCAGAATCTGTACTAAGAAGCTTAGCAATGACGTACGAGAATATTCCATCTATTATTAGGAAAAGAACTTCCAGCAAGGCTGGCAGTGCCAACCATTGTGGCAGCCCCCAAACTACTGAAGCTGAACGGGTTCTCAGTTTAGACAATCTAAACCTGAACCACGGCTTTATTAGCTAA 1338 0.4447 MFEFKKELEDFGFDSPQRDVFHLCLSSPNCNCDTTMLKPTPVAGSNKAQARRWTEEEDNLLIETVKKHEARNWRKTAAYLPGRTDVQCLHRWQKVLNPDLVKGSWTKEEDDCLTELVRRYGLKSWSEIAKFLPGRIGKQCRERWHNHLDPAIRKDAWTEEEESALAHYYQIFGSKWAEIARHLPGRTDNAIKNHWNCSMKKKMDAFSSPLGCDMNVATSSLCAPRIKPTYVTVNAEGQSFNEMVPLNQSHWLTHSVHNLPTNLILQNRSGEEFCSEVSCFEGTTPIKPIASSLDNSLHMFATNCVYFPPATRKACKSPKRQRVFSSDESDTDSPHWGSSKSADFETVGQVRNENNIKNDSISHNADSRGGSYTPPIPELRNHIGSIRPESVLRSLAMTYENIPSIIRKRTSSKAGSANHCGSPQTTEAERVLSLDNLNLNHGFIS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1072 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 96 IPR017930 -
Dod02g1072 445 Gene3D - 49 101 - -
Dod02g1072 445 PANTHER MYB PROTEIN-RELATED 52 232 - -
Dod02g1072 445 MobiDBLite consensus disorder prediction 330 344 - -
Dod02g1072 445 SUPERFAMILY Homeodomain-like 51 106 IPR009057 -
Dod02g1072 445 SUPERFAMILY Homeodomain-like 99 195 IPR009057 -
Dod02g1072 445 Pfam Myb-like DNA-binding domain 102 148 IPR001005 -
Dod02g1072 445 Pfam Myb-like DNA-binding domain 154 196 IPR001005 -
Dod02g1072 445 Pfam Myb-like DNA-binding domain 52 96 IPR001005 -
Dod02g1072 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 152 IPR017930 -
Dod02g1072 445 MobiDBLite consensus disorder prediction 317 344 - -
Dod02g1072 445 CDD SANT 104 148 IPR001005 -
Dod02g1072 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 203 IPR017930 -
Dod02g1072 445 CDD SANT 52 96 IPR001005 -
Dod02g1072 445 Gene3D - 155 213 - -
Dod02g1072 445 Gene3D - 102 153 - -
Dod02g1072 445 ProSiteProfiles Myb-like domain profile. 97 148 IPR001005 -
Dod02g1072 445 MobiDBLite consensus disorder prediction 357 381 - -
Dod02g1072 445 PANTHER TRANSCRIPTION REPRESSOR MYB5 52 232 - -
Dod02g1072 445 SMART sant 49 98 IPR001005 -
Dod02g1072 445 SMART sant 153 201 IPR001005 -
Dod02g1072 445 SMART sant 101 150 IPR001005 -
Dod02g1072 445 CDD SANT 156 196 IPR001005 -
Dod02g1072 445 ProSiteProfiles Myb-like domain profile. 45 96 IPR001005 -
Dod02g1072 445 ProSiteProfiles Myb-like domain profile. 149 199 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1072 Dod-Chr2 13388086 13390673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1072 53 409 MYB Transcription Factor Family AT5G02320 38.814 2.55e-73 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod02g1072 Myb_DNA-binding 2.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1072 - - aprc:113869477 511.916