Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1071 ATGGCGCCATTACCGGTGGAGCAAACCGGCGAATCAGCAGCGACGGAGTCTCAGAGATCTATTCCGACGCCGTTTCTGACGAAAACGTACCAGCTGGTTGATGATCCCTCTGCAGATGACCTAATTTCATGGAACGAAGATGGAACGGCCTTCATTGTTTGGCGACCAGCTGAATTCGCTCGTGATTTGCTCCCAAAGTATTTCAAACACAACAACTTCTCCAGCTTCGTTCGCCAGCTCAACACCTATGGATTTCGGAAGGTTGTCCCTGACCGCTGGGAATTCGCTAATGACTGTTTCCGGCGAGGGGAGAAAGGCCTGCTTCGCGACATTCAGCGGCGGAAAATTCCTCCGGCGACGGCACCGGCAGCCGTCCCAGCCAGCAATGCGGTGACGGTTGCGGTGGCGGCACTGGCGAGAGCGATATCGCCGACGACTTCCGGCGATGAACAGGTACTGTCCGCGAACTCATCTCCGATTGCTGCATCTGCAAACAACAATAATAGTGATAATACAGTGCACCGCACCACGAGTTGCACCGGTGCGCCAGAGCTCTTAGAACAGAACGAGAGGCTTAGGAAAGAGAACACGCAAATGAAACACGAGTTGAGCCAATTGAAGAGTCTGTGTAATAACATTCTCGCGTTGATGACCAATTATGCTTCTCGTTCTTCTTCTTCCGCATCTAGTGCTGTACCTGAAGGGAAAGGGTTGGAGCTATTGCCTGCAAAGCGCGTTTTGTATGCTGAGACGGTGGGAGGAGAGGTTCCCAAGCTGTTTGGGGTTTCGATTGCGATGAAACGTTCTAGGACTGAAAGCGAGGTTGAAACGGAGAGAGAACAAAATCAGACGCAAACGCAGACACAAACACGGTCCTCGCAGGAACCTGATCGCGGGTCAGATGTGAAATCTGAACCGCTGGATGGCGATGACTCGGATGATCAGGACCCTCGTTGGCTTGAGCTTGGGAAATGA 975 0.5241 MAPLPVEQTGESAATESQRSIPTPFLTKTYQLVDDPSADDLISWNEDGTAFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRKIPPATAPAAVPASNAVTVAVAALARAISPTTSGDEQVLSANSSPIAASANNNNSDNTVHRTTSCTGAPELLEQNERLRKENTQMKHELSQLKSLCNNILALMTNYASRSSSSASSAVPEGKGLELLPAKRVLYAETVGGEVPKLFGVSIAMKRSRTESEVETEREQNQTQTQTQTRSSQEPDRGSDVKSEPLDGDDSDDQDPRWLELGK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1071 324 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g1071 324 MobiDBLite consensus disorder prediction 1 20 - -
Dod02g1071 324 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g1071 324 Coils Coil 182 209 - -
Dod02g1071 324 MobiDBLite consensus disorder prediction 280 295 - -
Dod02g1071 324 Gene3D - 17 115 IPR036388 -
Dod02g1071 324 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2B 9 308 - -
Dod02g1071 324 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 308 IPR027725 -
Dod02g1071 324 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g1071 324 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g1071 324 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g1071 324 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g1071 324 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Dod02g1071 324 MobiDBLite consensus disorder prediction 267 324 - -
Dod02g1071 324 MobiDBLite consensus disorder prediction 160 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1071 Dod-Chr2 13384804 13386871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1071 16 324 HSF AT4G11660 52.870 3.71e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod02g1071 HSF_DNA-bind 2.2e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1071 K09419 - gmx:100791020 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1071 02 13384804 13386871 Dod02g1071 02 13384804 13386871 ECH