Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1069 ATGGCGACCACAAGGTCCTCCGAGGATATCGTCGACACGACGCCGTTTCTCGGCAACCCCGGCGGCGGATCCTCCGCCGAGGAATTCAATTCCGGCCGCCGATTCGTCCGGCGGCAGAGCCTCCGCCAGGCTGCGCGGTTCCTCCGCCAGGCCAGCGGCCGGAGGATGATGCGTGAGCCGTCGATGCTGGTCCGCGAGACGGCGGCGGAGCAATTGGAGGAGAGGCAGAGCGATTGGGCGTATTCGAAGCCGGTGGTGATCCTCGACTTAATCTGGAATTTGGCGTTCGTCGTGGTGGCGGCGACGGTGCTGGTGCTGAGCAGGAACGAGGTGCCAGCGATGCCTCTGAGGCTGTGGATTGTAGGGTACGCTATGCAGTGCGTGCTTCACATGGTGTGTGTCTGCTTCGAGTATAGGAGGAGGAGGAGGAACCAGCGCGCACAGTCCTTGAACGCTGTGGAAGAAAGGATTGGAAGCAGTGGGAATTTGAGCTCAGCTTCCAGGGAGGGTTCTGCACAGTACGTCACATTGGAGCAGTTGGATGAGGACGGTACTAGTGTTGCAAAGCATTTGGAATCAGCCAACACTATGTTTTCTTTTATTTGGTGGATTATTGGATTCTACTGGGTATCGGCTGGTGGTCAAGCTTTAGCTCAAGATTCCCCTCAGCTTTACTGGCTATGTATAATTTTCCTTGGTTTCGATGTTTTCTTTGTCATTTTCTGTGTCGCACTGGCATGTATCATTGGTATCGCTGTTTGCTGTTGTCTTCCATGTATCATTGCACTTCTTTATGCGGTTGCAGACCAGGAAGGAGCATCAAAAGAAGACATTGAGCAGTTGTCTAAGTTTAAATTTAGAAGAATTGAAACTAATGAGAAACGTGCTGGAGATACACAAGGACCTGTTGGAGGAATAATGACTGAATGCCGATCCGATTCACCTATTGAACATGTTCTTGCTGAGGAGGATGCGGAATGTTGCATATGCCTTTCTTCTTACGACGATGGGGTTGAACTAAGACAACTTCCTTGTGGTCACCATTTTCACTGTGCATGTGTCGATAAATGGCTGTATATTAATGCTACTTGCCCCCTCTGCAAGTATAACATCTTGAAAAGTAGCAACCTCAGTCAAGAGGAAGTGTAG 1149 0.5083 MATTRSSEDIVDTTPFLGNPGGGSSAEEFNSGRRFVRRQSLRQAARFLRQASGRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVILDLIWNLAFVVVAATVLVLSRNEVPAMPLRLWIVGYAMQCVLHMVCVCFEYRRRRRNQRAQSLNAVEERIGSSGNLSSASREGSAQYVTLEQLDEDGTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGFDVFFVIFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIETNEKRAGDTQGPVGGIMTECRSDSPIEHVLAEEDAECCICLSSYDDGVELRQLPCGHHFHCACVDKWLYINATCPLCKYNILKSSNLSQEEV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1069 382 SMART ring_2 327 367 IPR001841 -
Dod02g1069 382 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 382 - -
Dod02g1069 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 313 381 IPR013083 -
Dod02g1069 382 PANTHER TARGET OF ERK KINASE MPK-1 3 382 - -
Dod02g1069 382 MobiDBLite consensus disorder prediction 1 26 - -
Dod02g1069 382 ProSiteProfiles Zinc finger RING-type profile. 327 368 IPR001841 -
Dod02g1069 382 Pfam Ring finger domain 326 368 IPR001841 -
Dod02g1069 382 CDD RING-H2_RNF111_like 326 370 - -
Dod02g1069 382 SUPERFAMILY RING/U-box 317 374 - -
Dod02g1069 382 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1069 Dod-Chr2 13349326 13355373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1069 21 375 C3H Transcription Factor Family AT1G68070 49.721 1.24e-119 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1069 - - gmx:100790497 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1486 05 39713514 39719367 Dod02g1069 02 13349326 13355373 PCT