Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1068 ATGGGTAAGGCATCAAAATGGTTTCGCGGGCTTCTCGGTCTCAGTAAACCAGACTCGCCGTCTTCCACCGCTGCACCACCACCTTCAAAACCACCCAAAGAGAAACGACGATGGAGCTTCGTTAAGTCATACAGAGAGAATAATAAGGACCACCACCATGCTTCCTCTCACCCCTGGGGACCTGTGGAAGGCCCCGCCGTTCCTGACAAGCACGCGGCGGCAGTGGCTGCAGACACCACAGCCGTAGCGGAGGCAGCCGCCACCGCCGCCCATGTCACAGCCGCCGTGGCCAGACTCAGAAGCAGCTGCAGAAGCGCCATCGTAGTACGCGAAGAATGGGCAGCCATTAAGATTCAAGCCGCGTTTCGAGGCTGTTTGGCAAGGAGAGCACTGCGAGCGTTGAAGGGATTGGTGAAGCTACAGGCATTGGTGAGAGGCCACATTGAGAGAAAACGCACAGCAGAGTGGCTGCAAAGATTGCAAGCTCTCTTGCAAGCAAACGCACGTGTCCGTGCTGGGCGGGCCCAAATTCTGCAGAGTGCAAAGTTTTCCTCTGGCCACCCTCACGGTCCTACAACACCAGACAAATTTGAAAGCCCAATTAGATCCGTGAGCATGAAATATGATCAGTCATCATCGGTACTCAAGAGAAATAGCTCCAAATCCCGTTTCCAAATTGGCAATCCAGCGAAATGTGAGAATAGATCATATATTGGGGCGGATGAACGATCGTCATGGAATCAACGAAGATCGTGGACAAGAGCTTGTAGCATGGATGATGATAAAAGTGTCATGATTCTTGGAATTGATTCCCAAAAACCACACATGGGTTCAAAACGTAGAAGCCTCTTTTACTCCTCCAGCCAGCCTTTGGTCTCAGATCATTACAGTCATAGTTTCACCACCACAAAGGACTCAACATCTTTTCAATCAGGCCAAAGTCCATCTTCTGGTGAAGTTCAGTCTTACAACAGCCCTCTAAAAATCAACGAGGTTGAGGATAGTCCTCAAATTTTATCAGCCTCTTCTAAAGATAGAAGTCCTTGTACTCCTGCTAAGAATGACGACTCAAGAAGCTATCTAAGTAGTTACTCTGACTATCCAAATTACATGGCTTACACTGAGTCTTCAAAGGCAAAATTGAGATCTCTCAGTGCTCCAAAACTCAGACCCCAATGTGAGAGGTCTACTTCATTCAATAGGTGCTTGCTTCATGGGTTTGGCGAACCAAGATTGGCCACACAAAGGGTATCTGCATTGCGCGCAAGCTTCACTAGCAAAGCCTATCCAGGTTCTGGTCATTTGGACAACCTTGGTTTGCCTGTGGGGTATAGATACTGA 1341 0.4892 MGKASKWFRGLLGLSKPDSPSSTAAPPPSKPPKEKRRWSFVKSYRENNKDHHHASSHPWGPVEGPAVPDKHAAAVAADTTAVAEAAATAAHVTAAVARLRSSCRSAIVVREEWAAIKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAEWLQRLQALLQANARVRAGRAQILQSAKFSSGHPHGPTTPDKFESPIRSVSMKYDQSSSVLKRNSSKSRFQIGNPAKCENRSYIGADERSSWNQRRSWTRACSMDDDKSVMILGIDSQKPHMGSKRRSLFYSSSQPLVSDHYSHSFTTTKDSTSFQSGQSPSSGEVQSYNSPLKINEVEDSPQILSASSKDRSPCTPAKNDDSRSYLSSYSDYPNYMAYTESSKAKLRSLSAPKLRPQCERSTSFNRCLLHGFGEPRLATQRVSALRASFTSKAYPGSGHLDNLGLPVGYRY* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1068 446 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Dod02g1068 446 MobiDBLite consensus disorder prediction 1 67 - -
Dod02g1068 446 Gene3D - 112 154 - -
Dod02g1068 446 PANTHER IQ-DOMAIN 5-RELATED 1 441 - -
Dod02g1068 446 Pfam IQ calmodulin-binding motif 138 152 IPR000048 GO:0005515
Dod02g1068 446 Pfam IQ calmodulin-binding motif 113 132 IPR000048 GO:0005515
Dod02g1068 446 MobiDBLite consensus disorder prediction 339 360 - -
Dod02g1068 446 MobiDBLite consensus disorder prediction 30 57 - -
Dod02g1068 446 MobiDBLite consensus disorder prediction 296 323 - -
Dod02g1068 446 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Dod02g1068 446 SMART iq_5 133 154 IPR000048 GO:0005515
Dod02g1068 446 SMART iq_5 110 132 IPR000048 GO:0005515
Dod02g1068 446 Pfam Protein of unknown function (DUF4005) 344 396 IPR025064 -
Dod02g1068 446 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1068 Dod-Chr2 13337060 13340890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1068 1 446 IQD Protein Family AT4G23060 40.918 1.91e-61 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1068 - - gmx:100814244 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1484 05 39693600 39701502 Dod02g1068 02 13337060 13340890 PCT