Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1057 ATGAACATTTTCTCATCGTCAAATTCCTCGAAGCGCAATCCTCACTCCGACGATGAAGTGATACTAGCTTCGTCGATGCCTAAGAAGCGAGCGGGGCGGAGAGTTTTTAAGGAGACAAGGCACCCAGTGTACCGAGGAGTGCGAAGGAGGAACAACAACAAGTGGGTTTGCGAGATGCGTGTCCCCAACAACAACAACAAGAACAATAACAACACTAGGATTTGGCTTGGAACTTACCCTACCCCTGAAATGGCTGCACGTGCACACGATGTTGCGGCACTTGCGCTTCGTGGGAAGTCAGCTTGCCTCAACTTCGCTGACTCGGCGTGGCGGTTGACCGTGCCTGCATCCACCGACGCTGAGGAGATAAGGAGGGCGGCTGTGCAGGCTGCGGCGGCGTTTGCGGCTGAGGACAACAACCACCATCAGCAGGAGGTGCAGCAGATCAGTACTGTGAATGTTGGTGGTGGTGCTGATTATGAAGCTTGCAGCAGTGAAGATGCCAACGGAAGTAAGCCTCTTGGTGTTGAACAAGAAGGGGCTTATGTTCCGGAAGTTTCTGAATTCGAGGACTTGCATGATTTGGTCTTGAGTATCGCGGATGAGCCTTTGAGGTCTCCTCCCCCTTCTGGAAGAGATTATTGGAGGGACTGGAATGACGTGGAGATGTTTGATGCTGAGGTGTCACTGTGGAGTTTCTCAATCTGA 708 0.5212 MNIFSSSNSSKRNPHSDDEVILASSMPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNNNNKNNNNTRIWLGTYPTPEMAARAHDVAALALRGKSACLNFADSAWRLTVPASTDAEEIRRAAVQAAAAFAAEDNNHHQQEVQQISTVNVGGGADYEACSSEDANGSKPLGVEQEGAYVPEVSEFEDLHDLVLSIADEPLRSPPPSGRDYWRDWNDVEMFDAEVSLWSFSI* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1057 235 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 5 235 IPR045277 GO:0003700
Dod02g1057 235 SUPERFAMILY DNA-binding domain 43 108 IPR016177 GO:0003677
Dod02g1057 235 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 5 235 - -
Dod02g1057 235 Pfam AP2 domain 42 98 IPR001471 GO:0003700|GO:0006355
Dod02g1057 235 CDD AP2 44 108 IPR001471 GO:0003700|GO:0006355
Dod02g1057 235 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Dod02g1057 235 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Dod02g1057 235 ProSiteProfiles AP2/ERF domain profile. 43 106 IPR001471 GO:0003700|GO:0006355
Dod02g1057 235 MobiDBLite consensus disorder prediction 1 22 - -
Dod02g1057 235 SMART rav1_2 43 112 IPR001471 GO:0003700|GO:0006355
Dod02g1057 235 Gene3D AP2/ERF domain 43 107 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1057 Dod-Chr2 13211651 13212924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1057 17 233 AP2-EREBP Transcription Factor Family AT1G12610 45.415 3.00e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g1057 AP2 2.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1057 - - gmx:100789097 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1057 02 13211651 13212924 Dod02g1057 02 13211651 13212924 ECH
Dod05g1474 05 39494335 39495515 Dod02g1057 02 13211651 13212924 PCT