Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod02g1044 | ATGCATATGGCCTCAACGCTTCAACCTCGTAGTAGCTTCTTGCTAATTGCTTTTACATGGATGTTCACATTCATGAGAGGGCCAACAGTAGCAGTGGGAATTCTATTTCGACCCAGTGGATGGGTTCTTGCACATGCCACCTTTTATGGAGGAGCATGTGGGTACGGGAATTTGTTTCAGAATGGTTATGGGACAGATACTGCGGCTTTGAGCTCAACGTTGTTCAACAACGGCTATGCTTGCGGGACTTGTTACCAGATAAAATGCTACCAATCGAGTGCATGCTATAAAAATGTGGCCTTCACCACCGTCACTGCCACCAACCTCTGCCCTCCTAATTGGTCCGAGCCCTCCGATGACGGCGGGTGGTGCAACCCACCACGAACGCATTTTGACATGTCCAAGCCTGCCTTCATGAAGATTGCTCAGTGGAAGGCTGGCATCGTCCCTGTTCTCTACCGCAGGGTGCCATGCCAGAGGAAGGGTGGGCTCCGATTCACTTTCCAAGGAAATGGGTACTGGCTATTGGTATATGTGATGAACGTGGGAGGTGGAGGAGACATTTCTAGCATGTGGGTGAAAGGAAGCAGAACAGGATGGATTAGCATGAGCCACAACTGGGGTGCTTCCTACCAGGCCTTCGCAACTCTCTCTGCCCAATCCCTCTCTTTCAGGGTCACTTCATACACCACCAAGGAGACTATTATTGCATGGAATGTTGCTCCTTCCAATTGGAACGTTGGACTAACTTATTCCACCAACGTCAACTTCCACTGA | 777 | 0.4981 | MHMASTLQPRSSFLLIAFTWMFTFMRGPTVAVGILFRPSGWVLAHATFYGGACGYGNLFQNGYGTDTAALSSTLFNNGYACGTCYQIKCYQSSACYKNVAFTTVTATNLCPPNWSEPSDDGGWCNPPRTHFDMSKPAFMKIAQWKAGIVPVLYRRVPCQRKGGLRFTFQGNGYWLLVYVMNVGGGGDISSMWVKGSRTGWISMSHNWGASYQAFATLSAQSLSFRVTSYTTKETIIAWNVAPSNWNVGLTYSTNVNFH* | 259 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod02g1044 | 258 | PANTHER | EXPANSIN | 4 | 258 | - | - | |
Dod02g1044 | 258 | Pfam | Lytic transglycolase | 67 | 153 | IPR009009 | - | |
Dod02g1044 | 258 | SUPERFAMILY | PHL pollen allergen | 160 | 252 | IPR036749 | - | |
Dod02g1044 | 258 | Gene3D | - | 33 | 159 | IPR036908 | - | |
Dod02g1044 | 258 | PRINTS | Expansin signature | 62 | 76 | IPR002963 | GO:0009664 | |
Dod02g1044 | 258 | PRINTS | Expansin signature | 174 | 195 | IPR002963 | GO:0009664 | |
Dod02g1044 | 258 | PRINTS | Expansin signature | 239 | 255 | IPR002963 | GO:0009664 | |
Dod02g1044 | 258 | PRINTS | Expansin signature | 102 | 112 | IPR002963 | GO:0009664 | |
Dod02g1044 | 258 | PRINTS | Expansin signature | 162 | 174 | IPR002963 | GO:0009664 | |
Dod02g1044 | 258 | PRINTS | Expansin signature | 121 | 138 | IPR002963 | GO:0009664 | |
Dod02g1044 | 258 | PRINTS | Expansin signature | 138 | 151 | IPR002963 | GO:0009664 | |
Dod02g1044 | 258 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 173 | 253 | IPR007117 | - | |
Dod02g1044 | 258 | PRINTS | Expansin/Lol pI family signature | 239 | 253 | IPR007118 | GO:0005576 | |
Dod02g1044 | 258 | PRINTS | Expansin/Lol pI family signature | 200 | 214 | IPR007118 | GO:0005576 | |
Dod02g1044 | 258 | PRINTS | Expansin/Lol pI family signature | 49 | 67 | IPR007118 | GO:0005576 | |
Dod02g1044 | 258 | PRINTS | Expansin/Lol pI family signature | 146 | 162 | IPR007118 | GO:0005576 | |
Dod02g1044 | 258 | PRINTS | Expansin/Lol pI family signature | 71 | 89 | IPR007118 | GO:0005576 | |
Dod02g1044 | 258 | Pfam | Expansin C-terminal domain | 165 | 242 | IPR007117 | - | |
Dod02g1044 | 258 | Gene3D | - | 164 | 258 | IPR036749 | - | |
Dod02g1044 | 258 | PANTHER | EXPANSIN-A15 | 4 | 258 | IPR002963 | GO:0009664 | |
Dod02g1044 | 258 | SMART | dpbb_1 | 67 | 153 | IPR007112 | - | |
Dod02g1044 | 258 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 50 | 163 | IPR007112 | - | |
Dod02g1044 | 258 | SUPERFAMILY | Barwin-like endoglucanases | 40 | 181 | IPR036908 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod02g1044 | Dod-Chr2 | 13068396 | 13070204 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod02g1044 | 32 | 258 | Expansin Gene Family | AT1G12560 | 69.068 | 3.89e-118 | 337 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod02g1044 | - | - | gmx:100807807 | 467.618 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod02g1044 | 02 | 13068396 | 13070204 | Dod02g1044 | 02 | 13068396 | 13070204 | ECH | |
Dod05g1461 | 05 | 39218484 | 39220636 | Dod02g1044 | 02 | 13068396 | 13070204 | PCT |