Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1028 ATGAGAAGGCACCGCCAAATTCACCTCTCTCATGCTCTTTTGTGTGGCATTCTCTGCTTGCTTTCTTCGTGTGTCACGGTCTCACCAGCCACTGAGAAGGAGATTCTGCTCCAATTCAAGGGTAACATCACTAATGATCCCTTCAACAGCTTGAGTTCATGGGTTCCCAGTGGAAACCCTTGCCAAGACTACAGTGGTGTGTTCTGTAACTCTGAAGGTTTTGTAGAAAGAATCCATCTTTGGAACACTAGCTTGGCTGGAGTGTTGTCTCCAGCATTGTCTGGTTTGAAGAGGTTAAGGATTTTGACATTGTTTGGGAACCGGTTCTCTGGTAATATCCCAGATGGGTATGCTGATCTTCAAACTTTGTGGAATTTCAATTTGAGCTCCAATGCTTTGTCTGGTTCAATCCCAGAGTTCATTGGTGATTTTCCTAGCATTCGGTTTTTGGATTTGTCAAAGAATGGCTTCACTGGGGAGGTACCTTCAGCCTTGTTCAGGTACTGTTACAAGACCAAGTTTGTTTCTCTCTCTCATAACAATCTTGATGGTCCAATTCCTGCGTCATTGGTGAATTGCTTCAACCTTGAGGGGTTTGATCTTTCCTTCAACAATCTGAGCGGGGCTGTCCCTTTGCGGCTTTGTGATATTCCAAGGCTGTCTTATGTATCACTGAGGAGCAATGCCTTATCAGGGAGTGTGCAAGAACTTGTTTCGGGGTGCCTGAGTTTGAATCATTTGGATTTTGGTAATAATGGATTCACGGGTATGGCCCCATTCAGCATCCTTGCAATGCAAAATCTTACCTATTTCAATATATCGTATAATGGGTTCGGAGGAATTATTCCTGAGATCACTGCCTGTAGTGAGAGATTAGAATTCTTTGATGCTTCAAGGAATGATTTGGATGGGGAGTTTCCCTCCAGCATAATTAGATGCAAGAATCTTAAGCTCTTGGCCTTGGAGTTGAATAGGCTGAAAGGGAGTATCCCAGTTGATATTCAGGACTTGCAAAAACTATTAGTTATCAAATTGGGTAATAATTCAATAGGTGGAATGATTCCCAAAGGTTTTGGCAACATTGAGGAGCTCGAAGTTCTGGATTTGCACAATCTAAACCTTGTTGGTGAAATTCCAGTTGACATAAGCAATTGCAGGTTTCTTCTTGAGTTGGATGTTTCTGGTAATAGGTTAGAGGGAGAGATTCCTCAGACCCTATACAACATGACATACTTGGAAGCCCTTGACCTACACCAAAACCAGCTCAATGGAAGCATCCCACCAAGCCTTGGAAACCTGTCAAGGTTGCAAAACCTAGATCTATCACATAATTCGCTTTCTGGTTCAATCCCTCCTTCCCTTGGAAATTTAGGAAACCTGACACATTTTGATCTCTCGTTCAACAATCTCTCTGGTGTCATTCCTCAAATTGAAACAATAAAGCGTTTTGGTCCATCTGCATTTTCCAACAATCCTTTTCTCTGCGGTGCTCCTTTGGACCCCTCTTGCTCCGCAAATGGAACTACATCACCAGCTCCAGGGAAGGCTAAAGTTCTTAGTGTCTCTGCAATTGTCGCAATTGTTGCTGCAGCTGTGATTCTTACTGGGGTTTGTTTCGTGACCATCATGAATATTAGAGCTCGTCGCAGAAAAAAAGACAGTGACGAGATTATGATTGTCGAGAGCACACCTCTTGGATCAACACAATCAAATGTTTTATTTGGAAAGCTGGTTCTGTTCAGCAAAACTTTACCATCAAAATATGAAGATTGGGAGAGGGGTATCAAAGCATTGCGTGACAGAGAGTCTATCATAGGTGATGGATCAATAGGTACAGTGTACAGAACTGATTTTGAAGGTGGCATCTCAATTGCAGTGAAGAGGCTTGAGGTTCTAGGAAGGATCAGAGACCAGGAAGACTTTGAGCATGAAATTGGAAGACTAGGCAACCTTCAACACCCTAATTTAGTTGCTTTTCTAGGTTACTATTGGTCCTCTTCATTGTGTTTGATTCTATCAGAGTTTGTCCCAAATGGCAATCTCCTAGATAATCTACATGGGTTTGGAAATCCCGGAACAAGCACCAGCACCAGCAATAGGGAGTTATATTGGGCCAGAAGGTTCCAAATTGCACTTGGAACTGCAAGAGCCCTTGCCTATCTCCACCATGACTGTAGACCTCCAATTCTCCATCTCAACATTAAATCGTCTAACATTCTCTTAGATGACAAGTATGAGGCTAAGTTGTCAGATTATGGATTTGGAAAGTTACTTCCCATTTTGGACAATTACGGGACCAAGTTCCACACTGCTGTTGGGTATGTTGCACCAGAGTTGGCTCAAAGCCAGAGGCAGAGTGAGAAGTGTGATGTTTATAGTTTTGGGGTCATTCTTTTGGAGCTGGTTACAGGTAGGAAGCCTGTAGAAAGTCCATCAAGTAGTGAGGTGGTGGTTTTGTGTGAATATGTAAGAGTTTTGTTGGAGACAGGCTCAGCTTCAAACTGCTTTGACAGGAATCTGGTGGGCTTTGCTGAGAACGAACTAATTCAGGTTATGAAGTTGGGTCTAATTTGTACCTCAGAGGATCCTTTAAGGAGACCAAGCATGGCTGAGGTTGTCCAAATCCTTGAGTCCATTAGGAATGGATTAGGATCAAACTAA 2661 0.4288 MRRHRQIHLSHALLCGILCLLSSCVTVSPATEKEILLQFKGNITNDPFNSLSSWVPSGNPCQDYSGVFCNSEGFVERIHLWNTSLAGVLSPALSGLKRLRILTLFGNRFSGNIPDGYADLQTLWNFNLSSNALSGSIPEFIGDFPSIRFLDLSKNGFTGEVPSALFRYCYKTKFVSLSHNNLDGPIPASLVNCFNLEGFDLSFNNLSGAVPLRLCDIPRLSYVSLRSNALSGSVQELVSGCLSLNHLDFGNNGFTGMAPFSILAMQNLTYFNISYNGFGGIIPEITACSERLEFFDASRNDLDGEFPSSIIRCKNLKLLALELNRLKGSIPVDIQDLQKLLVIKLGNNSIGGMIPKGFGNIEELEVLDLHNLNLVGEIPVDISNCRFLLELDVSGNRLEGEIPQTLYNMTYLEALDLHQNQLNGSIPPSLGNLSRLQNLDLSHNSLSGSIPPSLGNLGNLTHFDLSFNNLSGVIPQIETIKRFGPSAFSNNPFLCGAPLDPSCSANGTTSPAPGKAKVLSVSAIVAIVAAAVILTGVCFVTIMNIRARRRKKDSDEIMIVESTPLGSTQSNVLFGKLVLFSKTLPSKYEDWERGIKALRDRESIIGDGSIGTVYRTDFEGGISIAVKRLEVLGRIRDQEDFEHEIGRLGNLQHPNLVAFLGYYWSSSLCLILSEFVPNGNLLDNLHGFGNPGTSTSTSNRELYWARRFQIALGTARALAYLHHDCRPPILHLNIKSSNILLDDKYEAKLSDYGFGKLLPILDNYGTKFHTAVGYVAPELAQSQRQSEKCDVYSFGVILLELVTGRKPVESPSSSEVVVLCEYVRVLLETGSASNCFDRNLVGFAENELIQVMKLGLICTSEDPLRRPSMAEVVQILESIRNGLGSN* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1028 886 Gene3D Ribonuclease Inhibitor 216 510 IPR032675 -
Dod02g1028 886 Pfam Leucine rich repeat 390 446 IPR001611 GO:0005515
Dod02g1028 886 PANTHER UNNAMED PRODUCT 12 882 - -
Dod02g1028 886 PRINTS Leucine-rich repeat signature 433 446 - -
Dod02g1028 886 PRINTS Leucine-rich repeat signature 412 425 - -
Dod02g1028 886 Gene3D Ribonuclease Inhibitor 145 215 IPR032675 -
Dod02g1028 886 Gene3D Ribonuclease Inhibitor 31 144 IPR032675 -
Dod02g1028 886 Pfam Protein kinase domain 602 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1028 886 SUPERFAMILY L domain-like 74 211 - -
Dod02g1028 886 CDD STKc_IRAK 605 879 - -
Dod02g1028 886 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Dod02g1028 886 PANTHER - 12 882 - -
Dod02g1028 886 Gene3D Transferase(Phosphotransferase) domain 1 680 884 - -
Dod02g1028 886 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Dod02g1028 886 ProSiteProfiles Leucine-rich repeat profile. 435 457 IPR001611 GO:0005515
Dod02g1028 886 Gene3D Phosphorylase Kinase; domain 1 600 679 - -
Dod02g1028 886 ProSiteProfiles Protein kinase domain profile. 599 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1028 886 SUPERFAMILY Protein kinase-like (PK-like) 602 877 IPR011009 -
Dod02g1028 886 SUPERFAMILY L domain-like 169 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1028 Dod-Chr2 12949869 12953093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1028 1 885 Receptor kinase-like Gene Family AT1G62950 62.625 0.0 1071
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Dod02g1028 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1028 - - gmx:100805681 1401.73