Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1023 ATGGATCCAATTACAGCACACGGCCATTCTCTTCCTCCTCCATTCCACACAACAAGAGATCTCCATCTGCACCACCACCAACAGCAGCAACACCAGTTCCACGCACTACAGCAAACCGCCACCGAAGACGAGCAAAGCGGAAGCAGTGGAGGCCTAAACCTGGCCAAAAGGGAAAGAGAAGAAAACAGCAACAACAACAACAGCGAAGGAAAAGACGGAACACCAGGAGGAGGAGGAGGAGGATCAGGCGAAACCGAAATGACAAGAAGACCAAGGGGAAGACCCGCCGGATCCAAGAACAAACCGAAGCCGCCGATCATCATCACGCGCGACAGCGCAAACGCGCTGAAAACGCACGTGATGGAAGTCGCGGACGGTTGCGACATCGTGGAGAGCGTGTCCAACTTCGCACGGCGGCGCCAGAGAGGGGTTTGCATCATGAGCGGAACCGGAACCGTCACCAACGTCACTCTCCGGCAACCGGCTTCTTCCGGTGCGGTTGTCACCCTCCACGGAAGGTTCGAGATCTTGTCCCTGGCCGGATCGTTCCTGCCGCCGCCGGCTCCGCCGGCTGCGTCCGGTTTGACCATATACTTGGCGGGAGGGCAAGGGCAGGTTGTTGGAGGGAGCGTTGTTGGTACGCTGATTGCTTCGGGGCCTGTTGTGATCATGTCTGCTTCGTTCAGCAACGCTGCTTATGAGAGGCTTCCTTTGGAGGAAGAGGATCCTTCGATGCCAATGCAAGGTGGTGGTGGTGGTGGTGCTTCGATTGATTCCCCGAGTGGTGCTGGGGGAGGCGGTGGCGGTGGTGGTGTTGGTCAGCAGCAGCAGACGCAGCTGTTGGGTGATGCAACTGCTCCGCTTTTCCATGGTTTGAATCCGAATCTTCTCAATTCTGTTCAGATGCCAACAGAGGCATTTTGGGCTACTGGTCGATCTCCTTACTGA 948 0.5675 MDPITAHGHSLPPPFHTTRDLHLHHHQQQQHQFHALQQTATEDEQSGSSGGLNLAKREREENSNNNNSEGKDGTPGGGGGGSGETEMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMSASFSNAAYERLPLEEEDPSMPMQGGGGGGASIDSPSGAGGGGGGGGVGQQQQTQLLGDATAPLFHGLNPNLLNSVQMPTEAFWATGRSPY* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1023 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 315 IPR014476 GO:0003680
Dod02g1023 315 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 230 IPR005175 -
Dod02g1023 315 Gene3D - 116 244 - -
Dod02g1023 315 MobiDBLite consensus disorder prediction 30 52 - -
Dod02g1023 315 CDD DUF296 117 184 IPR005175 -
Dod02g1023 315 MobiDBLite consensus disorder prediction 23 107 - -
Dod02g1023 315 SUPERFAMILY AF0104/ALDC/Ptd012-like 113 243 - -
Dod02g1023 315 MobiDBLite consensus disorder prediction 241 275 - -
Dod02g1023 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 315 - -
Dod02g1023 315 ProSiteProfiles PPC domain profile profile. 113 249 IPR005175 -
Dod02g1023 315 PIRSF ESCAROLA 16 315 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1023 Dod-Chr2 12899695 12900642 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1023 1 315 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 61.350 1.55e-88 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1023 - - gmx:100781436 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1023 02 12899695 12900642 Dod02g1023 02 12899695 12900642 ECH