Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1020 ATGGAGGGTAGAGACGTTGTTACCAGTGGTGGCGTCACGGTGGTGGGATCGGATGCTCCGTCGGACTACCATGTTGCACCGAGGGCCGAGAATCCAGCTCCGCCCGGTGGATCGGCCGCAACGACGGCGATGCCGGCCGCTCAGGGCGGTGCTGCGCCGTCGCAGCCTGCGGGTTCAGCGGCGCCGGCGAAGAAGAAAAGGGGTCGACCCAGGAAGTACGGACCTGACGGGTCGGTAGCGATGGCGCTGTCTCCGAAGCCGATTTCTTCCTCTGCTCCGTCGCCAGTGATCGATTTCTCGGCGGAGAAGCGCGGGAAAGTGAAGCAACCTAGCTCCTTCAGCAAAGCCAAGTTTGAAGTGGAGAATTTAGGTGAATGGGTTGCATGCTCAGTTGGTGCTAATTTTACACCCCATATCATCACTGTTAATTCAGGGGAGGACATTACTATGAAGGTAATATCTTTTTCTCAGCAAGGGCCACGAACTATATGCATTCTTTCTGCAAACGGAGTCATATCAAGCGTCACACTTCGTCAGCCTGATTCTTCTGGAGGCACATTGACATACGAGGGACGGTTTGAAATTCTGTCTTTAACTGGCTCATTCATGCCAAATGAAAGTGGTGGAACACGGAGCAGATCTGGTGGCATGAGTGTTGCTTTAGCAAGTCCAGATGGACGCGTTGTAGGTGGTGGAGTAGCTGGTCTATTGGTAGCTGCAAGTCCTGTGCAGGTCGTGGTAGGCAGTTTTCTGGCAGGCAACCAACATGAACCAAAGCTAAAAAAACAGAAACTTGAGGTAATATCAACAGCCACACCAACTGCAGCTGTTCCTGTGTCTACTGCTGATCCAATAACTAATCTATCTTCTTCTTCCTCCTTCCGAGGCGATAATTGGTCCGCAATTCCAGCAGTGGCGGACACCAGGAATAACCCAACTGACATTAATGTTTCACTTCCTGGAGGTTAA 969 0.5201 MEGRDVVTSGGVTVVGSDAPSDYHVAPRAENPAPPGGSAATTAMPAAQGGAAPSQPAGSAAPAKKKRGRPRKYGPDGSVAMALSPKPISSSAPSPVIDFSAEKRGKVKQPSSFSKAKFEVENLGEWVACSVGANFTPHIITVNSGEDITMKVISFSQQGPRTICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLTGSFMPNESGGTRSRSGGMSVALASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEPKLKKQKLEVISTATPTAAVPVSTADPITNLSSSSSFRGDNWSAIPAVADTRNNPTDINVSLPGG* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1020 322 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 253 - -
Dod02g1020 322 MobiDBLite consensus disorder prediction 1 94 - -
Dod02g1020 322 CDD DUF296 136 227 IPR005175 -
Dod02g1020 322 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 250 IPR005175 -
Dod02g1020 322 ProSiteProfiles PPC domain profile profile. 132 271 IPR005175 -
Dod02g1020 322 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 10 320 - -
Dod02g1020 322 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 10 320 IPR039605 GO:0003680
Dod02g1020 322 Gene3D - 137 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1020 Dod-Chr2 12840602 12847121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1020 10 319 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 60.767 8.49e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1020 - - zju:107406129 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1020 02 12840602 12847121 Dod02g1020 02 12840602 12847121 ECH
Dod02g3170 02 66668396 66673190 Dod02g1020 02 12840602 12847121 ECH