Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1012 ATGGACTTGAAATCCTCTCTGGACCCAGAGGGAAAGATCCTTGGCTCTTGGACCAGTGATGGAGACCCATGCAGTGGCTTTTTCGAAGGTGTTGCGTGCAATGAGCACCGGAAAGTGGCCAACATCTCATTGCAGGGAAAGGGCCTTTCAGGGTGGTTATCTCCTTCTGTGGCTGAACTTCAATGCTTATCTGGTTTATACCTGCATTACAACAATCTTTCTGGCGAGATACCCAAACAGATTTCAAATCTCACTGATCTGGTCGATCTCTATCTCGATGTGAATAGTCTTTCTGGAGCCATACCTCCTGAGATCGGCAACATGGCTAGTCTCCAAGTGCTGCAGTTGGGCGATAACCAGTTGGTGGGGAATATACCCACACAGATGGGTTCCTTGAAGCAGCTTAGTACTCTTGCATTGCAATATAACAAGTTAACTGGCCAAATTCCTCTAAGCCTGGGCAATTTGGAGAAGCTAAGCAGGCTGAATTTGAGCTTTAACAACTTCAGTGGTATGATCCCTGCAACACTAGCCCATATTGCACATTTGGAAGTTCTAGACATTCAAAACAATTCTCTATCAGGGATTGTTCCTTTGGCATTGAAGAGACTGGGGGAAGGATTCCAAGGTGCAAACAACCCAGGTTTATGTGGGCTTCGGTTTTCTACTCTCAAAGCATGCAACAGAGATCAAGGCTTAAACGTTAACCATATTGATGACCCAGACCAAGATCGATCCAAAAATAACAATAATGTTCTTCCGGAGCCTGCAAATGTGCAGTTGAATTGTAACCAGGCTCATTGCTCGAGATCAAGGAGGTTTCCCCAAGCTGTCATCACAGCAAGTGTTATAACTATCAGCCTCACATTCTTCAGTGCCGGATTTTTTATTTTTGTCAAATACCGCCGTCAAAAGCAGAGGATTAGGAATACATCAGACTCTTCAGAAGGGAAACTCAGTCCTTATCAGCCTAAAGACTTCTCCAGAAAAACGCCATCTCCACTTGTTAACCTTGAGTATTGTAATGGATGGGATCCATTGTCTGATGGTACTCAAAATGCAGGTGGATTATCCAATGAATATCTTAACCAATTCAGGTTTAATGTGGATGAGGTTGAATCTGCAACGCAGTACCTTTCGGAAGCCAATTTACTGAGAAAAAGCAAATTCTCAGCTGTTTATAAAGGAGTTCTCAGAGATGGTTCTCTTGTGGCTATCAGAAGCATTAACGTGTCATGCTGCAAAACCGAGGAAGCTGAGTTTGTAAAAGGGCTGAGCTTAGTAACCTCACTGAGACATGAAAACCTTGTTAGGCTGAGAGGTTTCTGTTGCTCAAGGAGTAGAGGTGAATGCTTCCTGATCTATGACTTTGCCACCAAGGGTAACCTGTCTCAATATCTTGATATGGAAGATGAAAATGGGCAAGTGCTTGAATGGTCCAAGAGGGTTTCCATCATCAAGGGCATTGCAAAGGGTATTGGATATTTGCACAGCAATGAAGCAAGCAAACCTTCAATAGTACACCAGAATATATCAGTTGAAAATGTTCTCCTTGACAATCAGTTTAACCCACTGATCATGGATGCTGGACTCCCTAAGCTTCTTGCAGATGATGTTGTTTTCTCAGCTCTGAAAGTAAGTGCTGCCATGGGATACCTGGCTCCAGAATACATTATTACTGGACGTTTCACTGAGAAGAGTGACATATACGCATTTGGGGTTATTGTTCTTCAAGTTCTGTCTGGGAAGAAAACAATTGGTGGTTCAATACGGATGGCAGTTGAGTCATCCAGGTTTGATGATTTTGTTGACACAAATCTGAGAGGAAGATACTCTAAAGCTGAGGCAGCAGTGCTTTCAAAGCTTGCAATGCAGTGCACCAATGAGCTTCCTGACCAAAGGCCAAGCATGGTGGATGTGATTCAGGAGCTGAGCGTGTTTCCTGCTCATTCATGA 1956 0.4366 MDLKSSLDPEGKILGSWTSDGDPCSGFFEGVACNEHRKVANISLQGKGLSGWLSPSVAELQCLSGLYLHYNNLSGEIPKQISNLTDLVDLYLDVNSLSGAIPPEIGNMASLQVLQLGDNQLVGNIPTQMGSLKQLSTLALQYNKLTGQIPLSLGNLEKLSRLNLSFNNFSGMIPATLAHIAHLEVLDIQNNSLSGIVPLALKRLGEGFQGANNPGLCGLRFSTLKACNRDQGLNVNHIDDPDQDRSKNNNNVLPEPANVQLNCNQAHCSRSRRFPQAVITASVITISLTFFSAGFFIFVKYRRQKQRIRNTSDSSEGKLSPYQPKDFSRKTPSPLVNLEYCNGWDPLSDGTQNAGGLSNEYLNQFRFNVDEVESATQYLSEANLLRKSKFSAVYKGVLRDGSLVAIRSINVSCCKTEEAEFVKGLSLVTSLRHENLVRLRGFCCSRSRGECFLIYDFATKGNLSQYLDMEDENGQVLEWSKRVSIIKGIAKGIGYLHSNEASKPSIVHQNISVENVLLDNQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYIITGRFTEKSDIYAFGVIVLQVLSGKKTIGGSIRMAVESSRFDDFVDTNLRGRYSKAEAAVLSKLAMQCTNELPDQRPSMVDVIQELSVFPAHS* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1012 651 SUPERFAMILY L domain-like 14 202 - -
Dod02g1012 651 Pfam Leucine rich repeat N-terminal domain 2 34 IPR013210 -
Dod02g1012 651 MobiDBLite consensus disorder prediction 234 255 - -
Dod02g1012 651 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 646 - -
Dod02g1012 651 Gene3D Phosphorylase Kinase; domain 1 350 457 - -
Dod02g1012 651 SMART LRR_typ_2 180 203 IPR003591 -
Dod02g1012 651 SMART LRR_typ_2 108 132 IPR003591 -
Dod02g1012 651 SMART LRR_typ_2 156 179 IPR003591 -
Dod02g1012 651 SMART LRR_typ_2 60 84 IPR003591 -
Dod02g1012 651 MobiDBLite consensus disorder prediction 309 331 - -
Dod02g1012 651 ProSiteProfiles Protein kinase domain profile. 379 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1012 651 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 1 646 - -
Dod02g1012 651 Gene3D Ribonuclease Inhibitor 1 148 IPR032675 -
Dod02g1012 651 Gene3D Transferase(Phosphotransferase) domain 1 459 647 - -
Dod02g1012 651 SUPERFAMILY Protein kinase-like (PK-like) 357 645 IPR011009 -
Dod02g1012 651 Pfam Protein tyrosine and serine/threonine kinase 384 644 IPR001245 GO:0004672|GO:0006468
Dod02g1012 651 Gene3D Ribonuclease Inhibitor 149 213 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1012 Dod-Chr2 12788924 12791771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1012 1 492 Miscellaneous Gene Families AT4G22730 58.250 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Dod02g1012 PK_Tyr_Ser-Thr 9.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1012 - - gmx:100777169 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1012 02 12788924 12791771 Dod02g1012 02 12788924 12791771 ECH