Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1003 ATGGCAGCAAAACTTGTGCTTTGTGTAGTGCTACTCCTCACGAACCTCGTCACTTACACGGCTAGCAGCACTACCCCAGGAAACTTCATAAAGTCCTCATGCAGGGCCACACGCTACCCGGCTCTGTGCGTTCAATGCCTCCTGGGATACGCAACCATGATCCGCCAAAGCGAGCGACAACTCGCCATAACGGCTTTATCAGTGAGCATATCAAGGACTCGATCATGCTCATCATTCGTGAAGAAGATAGCCAAGGCAACAAGGGGAATGAAGCCTAGAGTTCACGGAGCAGTACAAGACTGCATAGAGAACATGGGAGACAGTGTTGACCGTCTAAGCCAATCGGTGAGGGAGCTGGGGCGTGTCGGCGTTGGGGAGGACTTCGAGTGGCACATGAGCAACGTTCAGACATGGGTCAGTGCTGCTCTAACTGATGATAACACTTGTCTTGATGGCTTTGCTGGTCCTGCCATGAATGGGAACGTGAAGGCTGCCATAAGGAACAGGGTCCTTCATGTTGCTCAGGTTACAAGTAATGCACTCGCTTTGGTTAATCGCTTTGCCTCCAGGCACCGAGCTCCACAACACAACTGA 594 0.5185 MAAKLVLCVVLLLTNLVTYTASSTTPGNFIKSSCRATRYPALCVQCLLGYATMIRQSERQLAITALSVSISRTRSCSSFVKKIAKATRGMKPRVHGAVQDCIENMGDSVDRLSQSVRELGRVGVGEDFEWHMSNVQTWVSAALTDDNTCLDGFAGPAMNGNVKAAIRNRVLHVAQVTSNALALVNRFASRHRAPQHN* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1003 197 CDD PMEI-like_3 32 189 - -
Dod02g1003 197 PANTHER PECTINESTERASE INHIBITOR 9 11 191 - -
Dod02g1003 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 185 IPR006501 GO:0004857
Dod02g1003 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 187 IPR035513 -
Dod02g1003 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 187 IPR035513 -
Dod02g1003 197 SMART PMEI_2 25 183 IPR006501 GO:0004857
Dod02g1003 197 Pfam Plant invertase/pectin methylesterase inhibitor 28 183 IPR006501 GO:0004857
Dod02g1003 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1003 Dod-Chr2 12706906 12707499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1003 30 184 Carbohydrate Esterase AT3G14310 29.677 6.76e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1003 - - mtr:MTR_5g012000 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1003 02 12706906 12707499 Dod02g1003 02 12706906 12707499 ECH