Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1002 ATGGCCGACGAAGCCAAAGCCAAAGGCAACGCCGCCTTCTCCTCCGGCGACTACGCCTCCGCCATCCGCCACTTCTCCGACGCCATCGCCCTCTCCCCTGACAACCACGTCCTCTACTCTAACCGATCCGCCGCCTACGCCTCCCTCCAAAAATACTCCGAAGCCTTAGCCGACGCCAAGAAGACCGTCGACCTCAAGCCCGACTGGTCCAAAGGCTACAGCCGCCTCGGCGCCGCACACCTCGGCCTCTCCCAATACGACGATGCCGTTTCCGCCTACAAAAAAGGCCTCGAAATCGACCCCAATAACGAACCCTTAAAATCCGGCCTCGCTGACGCCCAGGCCGCCACTTCACGGGCCCGCTCGGCCCCTCCTCCGGCCAACCCCTTCGGAGACGCCTTCTCCGGGCCCGAGATGTGGGCCCGCCTCACCGCTGACCCAACCACTAGGGCTTTCCTCCAGCAGCCTGATTTCGTGAAGATGATGCAGGACATTCAGAAGGACCCTAACAAGCTGAACTTGTACTTGAAGGATCAGAGGGTGATGCAGGCCATTGGTGTTCTTCTCAACGTCAAGATTCGGACCCCGACCGATGATGCTGACATGGCGGCAGAGTCGTCGCCTTCGCCGTCTGAGAGGAAGAGGGCCGCCGAGGCGGAGCCTCCGAAGCAGCCCGAGCCCGAGCCCGAGCCTGAGCCCGAGCCCATGGAGGTCACCGAGGAGGAGAGGGAGAAGACGGAGAGGAAGGCGGAGGCTCAGAGGGAGAAGGAGGCTGGGAATGCTGCGTACAAGAAGAAGGATTTCGATGCGGCGATTCAGCATTACACAAAGGCTTTGGAGTTGGATGATGAGGATATATCTTACCTCACCAACCGTGCCGCTGTTTACTTGGAAATGGGAAAGTATGAGGAATGCATAAAAGACTGTGACAAGGCTGTTGAAAGAGGAAGAGAACTAAGATCAGACTTCAAGATGATAGCAAGAGCTTTGACAAGGAAAGGAACTGCCTTGGTCAAGATGGCTAAATGCTCAAAGGATTATGAACCTGCCATTGAGACTTTCCAGAAGGCACTCACAGAACACCGCAACCCTGACACATTGAAGAAACTCAATGAAGCTGAAAAGGCTAAGAAAGATCTAGAACAAGAAGAATATTTTGATCCAAAATTGGCTGATGAGGAGCGAGAGAAAGGAAATGAATTCTTCAAGGAACAGAAGTATCCCGAGGCTGTGAAGCATTACACAGAGGCTATAAGGAGAAATCCTAAAGATCATCGGGCCTACAGTAACAGAGCTGCATGCTACACTAGACTGGGGGCAATGCCTGAAGGTTTGAAGGATGCAGAGAAGTGCATTGAGCTTGATCCTACTTTTGCAAAGGGTTATACCAGGAAAGGTGCTATACAATTTTTCATGAAAGAATATGACAAGGCTTTGGAAACATACAAGGAGGGTTTGAAGCATGACCCTAACAATCAGGAGTTACTTGATGGCATTGGAAGGTGTGTACAACAAATTAATAAGGCAAGCCGTGGGGATTTAACTCCTGAGGAATTGAAGGAGAGACAGGCCAAGGCTATGCAGGACCCAGAGATACAGAACATCCTCCAAGACCCTGTTATGAGACAGGTATTGATTGATTTCCAGGAAAATCCCAAGGCTGCACAGGAACATACAAAGAATCCAATGGTGATGAGCAAAATCCAAAAGCTGATCAGTGCAGGAATTGTCCAGATGAGGTAA 1743 0.5181 MADEAKAKGNAAFSSGDYASAIRHFSDAIALSPDNHVLYSNRSAAYASLQKYSEALADAKKTVDLKPDWSKGYSRLGAAHLGLSQYDDAVSAYKKGLEIDPNNEPLKSGLADAQAATSRARSAPPPANPFGDAFSGPEMWARLTADPTTRAFLQQPDFVKMMQDIQKDPNKLNLYLKDQRVMQAIGVLLNVKIRTPTDDADMAAESSPSPSERKRAAEAEPPKQPEPEPEPEPEPMEVTEEEREKTERKAEAQREKEAGNAAYKKKDFDAAIQHYTKALELDDEDISYLTNRAAVYLEMGKYEECIKDCDKAVERGRELRSDFKMIARALTRKGTALVKMAKCSKDYEPAIETFQKALTEHRNPDTLKKLNEAEKAKKDLEQEEYFDPKLADEEREKGNEFFKEQKYPEAVKHYTEAIRRNPKDHRAYSNRAACYTRLGAMPEGLKDAEKCIELDPTFAKGYTRKGAIQFFMKEYDKALETYKEGLKHDPNNQELLDGIGRCVQQINKASRGDLTPEELKERQAKAMQDPEIQNILQDPVMRQVLIDFQENPKAAQEHTKNPMVMSKIQKLISAGIVQMR* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1002 580 PANTHER HSP70-HSP90 ORGANIZING PROTEIN 3 1 579 - -
Dod02g1002 580 Gene3D Tetratricopeptide repeat domain 249 385 IPR011990 GO:0005515
Dod02g1002 580 MobiDBLite consensus disorder prediction 238 261 - -
Dod02g1002 580 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Dod02g1002 580 Pfam Tetratricopeptide repeat 459 492 IPR001440 GO:0005515
Dod02g1002 580 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Dod02g1002 580 Gene3D Tetratricopeptide repeat domain 389 504 IPR011990 GO:0005515
Dod02g1002 580 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
Dod02g1002 580 Gene3D - 126 193 - -
Dod02g1002 580 Pfam Tetratricopeptide repeat 7 68 - -
Dod02g1002 580 PANTHER TPR REPEAT CONTAINING PROTEIN 1 579 IPR045248 GO:0006457|GO:0030544|GO:0051879
Dod02g1002 580 Pfam STI1 domain 137 190 IPR041243 -
Dod02g1002 580 Pfam STI1 domain 521 572 IPR041243 -
Dod02g1002 580 ProSiteProfiles TPR repeat profile. 252 285 IPR019734 GO:0005515
Dod02g1002 580 Coils Coil 363 383 - -
Dod02g1002 580 MobiDBLite consensus disorder prediction 198 261 - -
Dod02g1002 580 ProSiteProfiles TPR repeat profile. 391 424 IPR019734 GO:0005515
Dod02g1002 580 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Dod02g1002 580 MobiDBLite consensus disorder prediction 211 230 - -
Dod02g1002 580 SUPERFAMILY TPR-like 390 503 IPR011990 GO:0005515
Dod02g1002 580 SMART CBM 136 175 IPR006636 -
Dod02g1002 580 SMART CBM 529 568 IPR006636 -
Dod02g1002 580 Gene3D - 509 580 - -
Dod02g1002 580 ProSiteProfiles TPR repeat profile. 459 492 IPR019734 GO:0005515
Dod02g1002 580 SMART tpr_5 70 103 IPR019734 GO:0005515
Dod02g1002 580 SMART tpr_5 252 285 IPR019734 GO:0005515
Dod02g1002 580 SMART tpr_5 2 35 IPR019734 GO:0005515
Dod02g1002 580 SMART tpr_5 36 69 IPR019734 GO:0005515
Dod02g1002 580 SMART tpr_5 425 458 IPR019734 GO:0005515
Dod02g1002 580 SMART tpr_5 459 492 IPR019734 GO:0005515
Dod02g1002 580 SMART tpr_5 391 424 IPR019734 GO:0005515
Dod02g1002 580 SMART tpr_5 327 364 IPR019734 GO:0005515
Dod02g1002 580 SMART tpr_5 286 319 IPR019734 GO:0005515
Dod02g1002 580 SUPERFAMILY TPR-like 2 114 IPR011990 GO:0005515
Dod02g1002 580 Pfam TPR repeat 259 300 - -
Dod02g1002 580 Pfam TPR repeat 398 439 - -
Dod02g1002 580 SUPERFAMILY TPR-like 251 378 IPR011990 GO:0005515
Dod02g1002 580 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Dod02g1002 580 Coils Coil 236 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1002 Dod-Chr2 12700273 12708247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1002 250 395 U-box Gene Family AT3G07370 27.397 1.26e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1002 K09553 - gmx:100816776 935.25