Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0956 ATGGCACCAAACAATGATGAATCAACTAAGAAAACATACAACAGAGGAGCATGGACCCCGGAGGAAGACCAGAAGCTAGCCCAATGCATTGAGATTCACGGTGCAAAGAGGTGGAAGACCGTTGCAACCAAATCAGGTCTAAATAGATGTGCTTGCAGGCTGAGATGGCTGAACTATCTGAGACCGAATATCAAGAGGGGCAACATATCACATGAAGAAGAGGACTTGATCATAAGGCTTCACAAGCTGCTAGGAAACAGATGGTCTTTAATAGCTAAGAGACTTCCAGGACGAACAGACAATGAAATTAAGAACTACTGGAATTCATGTTTGTGCAAAAAAGTTAATCACAAAGAGGAGGAAAAACCAGAACCTTCAACGGCACAAGAAACTCGTGCGATTCAGAACCCTGGGGACAAAGCAACAGCAGAGAATGAGGAGGCCATTTATGGAAGTAGGGACTTCGAAATCAACTTTGATGTGAACGAATTCTTGGACTTCTCCACACCCTATGCGTTGGATTGGGTAAACAAGTTTCTAGAACTTGATGAAATTCCTGAGAACACAGAGTAG 573 0.4328 MAPNNDESTKKTYNRGAWTPEEDQKLAQCIEIHGAKRWKTVATKSGLNRCACRLRWLNYLRPNIKRGNISHEEEDLIIRLHKLLGNRWSLIAKRLPGRTDNEIKNYWNSCLCKKVNHKEEEKPEPSTAQETRAIQNPGDKATAENEEAIYGSRDFEINFDVNEFLDFSTPYALDWVNKFLELDEIPENTE* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0956 190 SMART sant 65 113 IPR001005 -
Dod02g0956 190 SMART sant 14 62 IPR001005 -
Dod02g0956 190 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 3 190 - -
Dod02g0956 190 ProSiteProfiles Myb-like domain profile. 10 60 IPR001005 -
Dod02g0956 190 CDD SANT 17 60 IPR001005 -
Dod02g0956 190 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Dod02g0956 190 Pfam Myb-like DNA-binding domain 15 60 IPR001005 -
Dod02g0956 190 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 60 IPR017930 -
Dod02g0956 190 Gene3D - 69 140 - -
Dod02g0956 190 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Dod02g0956 190 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Dod02g0956 190 SUPERFAMILY Homeodomain-like 14 107 IPR009057 -
Dod02g0956 190 Gene3D - 7 66 - -
Dod02g0956 190 CDD SANT 70 108 IPR001005 -
Dod02g0956 190 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 190 - -
Dod02g0956 190 MobiDBLite consensus disorder prediction 118 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0956 Dod-Chr2 12144021 12144991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0956 13 161 MYB Transcription Factor Family AT5G40330 47.097 1.19e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod02g0956 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0956 K09422 - gmx:100816449 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0956 02 12144021 12144991 Dod02g0956 02 12144021 12144991 ECH