Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0955 ATGCTGATGAAGAGGGGCGGCGGTGATGGGAAGCGCCCTACGTACCGCGGGGTACGGATGCGGCAATGGGGCAAATGGGTCTCAGAAATCAGAGAGCCAAAGAAAAGGTCCAGAATTTGGCTTGGCACTTTCCCCACGCCGGAGATGGCGGCTCGAGCCCACGACGTCGCGGCTCTCGCAATCAAAGGCGCCTCCGCTTTCCTCAATTTCCCAGAACTGGCCCCGCACCTTCCTCGTCCGACCACCAGTTCCCCCAAGGACATCCAAGCCGCGGCCGCAAAGGCAGCCGCAATTAATTACCAAACGAGCCATGAAGCCGAAGCCGAATCCGAGCCTGAGCCGAGCCGAGCTGTGTCGCTGTGTTCCAACTACAACTACAGTCACACTGGTACTCATCAAGAATCGTCGTTAGTGGGAGAGGACGACGCGTTCTTGGACCTCCCTGATCTGTTACTGGACTCCAATCACAGCGCAGGTGAGTTTCACTTTCATTATTACTCCACGCCGTGGCTCGTGGCCGGAGTCGACCATCTCGACTGTGGTTTCCGGCTGGAAGATCCTTCTTTCCTATGGGACTCTTACTAG 585 0.5709 MLMKRGGGDGKRPTYRGVRMRQWGKWVSEIREPKKRSRIWLGTFPTPEMAARAHDVAALAIKGASAFLNFPELAPHLPRPTTSSPKDIQAAAAKAAAINYQTSHEAEAESEPEPSRAVSLCSNYNYSHTGTHQESSLVGEDDAFLDLPDLLLDSNHSAGEFHFHYYSTPWLVAGVDHLDCGFRLEDPSFLWDSY* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0955 194 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Dod02g0955 194 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Dod02g0955 194 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Dod02g0955 194 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Dod02g0955 194 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 173 - -
Dod02g0955 194 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Dod02g0955 194 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 7 173 - -
Dod02g0955 194 SUPERFAMILY DNA-binding domain 14 72 IPR016177 GO:0003677
Dod02g0955 194 Pfam AP2 domain 13 63 IPR001471 GO:0003700|GO:0006355
Dod02g0955 194 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0955 Dod-Chr2 12118756 12120724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0955 4 190 AP2-EREBP Transcription Factor Family AT2G44940 53.110 1.81e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g0955 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0955 - - gmx:100101914 228.794