Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0946 ATGGCTAACCCTGCAGAAGTTTCTGCCCTCAACCTCATCAAAATCCATCTTCTAGGCGAACTCTCCCCACTCCCTCTTCCCCAAAAAACCTTCTCCTTCCAATTCAATCAACCAAACCCTACTTCCTCCAAATCCCAATCCGATTCCCTCTGTTCCCAATCTTCCACTTCCGAATCTTCCTCCTCCGTCGACCAATACTTCACCCGACTCCTCGATTTCCCATCAAATTCACAGTTCCACACCAAATTCTCACACACAATCACAACACCGTACGCTGGGCCTCAAACCACGGAGAAGAAACCACCTCAGCCGAATCGAAAGCCGTCTCTGCAAATCTCAGTCCCGAAGAAGACGGAGTGGATCAAGTTCGGAGAACCAGAGGAGGAGGAGAACCACACGAAGAGCGAAGAGAAGAAGAAACACTACAGAGGTGTCCGACAGAGACCGTGGGGGAAGTTTGCGGCGGAGATCCGAGACCCGCACAAGCGCGGGTCAAGGGTGTGGCTGGGGACGTTCGACACCGCCATCGAAGCTGCCAAGGCCTACGACCGCGCGGCCTTCAAGCTCCGCGGCGCCAAGGCTATCCTCAACTTCCCACTTGAAGCCGGCGCCGATGACCGAAAACGGCGCCGTGAGGAGGAGGCGGAGGCGGAGGCGGAGGAGGTGGAAGTGGCGAAGAGGGAAAAGACGGAGGAATCGGAGATTAGCCGTATAAGGGAAACTCCGTTAACGCCGTCTAGTTGGATTGGGTTCTGGGACACTGATGTGAAAGGTGTTTTCGCTGTGCCGCCGTTGTCGCCGTTATCTCCCCACCCGCCTTTGGGTTATCCACAGCTTATGGTTGTGTGA 849 0.5512 MANPAEVSALNLIKIHLLGELSPLPLPQKTFSFQFNQPNPTSSKSQSDSLCSQSSTSESSSSVDQYFTRLLDFPSNSQFHTKFSHTITTPYAGPQTTEKKPPQPNRKPSLQISVPKKTEWIKFGEPEEEENHTKSEEKKKHYRGVRQRPWGKFAAEIRDPHKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGAKAILNFPLEAGADDRKRRREEEAEAEAEEVEVAKREKTEESEISRIRETPLTPSSWIGFWDTDVKGVFAVPPLSPLSPHPPLGYPQLMVV* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0946 282 PRINTS Ethylene responsive element binding protein signature 181 201 IPR001471 GO:0003700|GO:0006355
Dod02g0946 282 PRINTS Ethylene responsive element binding protein signature 142 153 IPR001471 GO:0003700|GO:0006355
Dod02g0946 282 CDD AP2 140 199 IPR001471 GO:0003700|GO:0006355
Dod02g0946 282 MobiDBLite consensus disorder prediction 87 112 - -
Dod02g0946 282 Coils Coil 208 232 - -
Dod02g0946 282 MobiDBLite consensus disorder prediction 205 238 - -
Dod02g0946 282 MobiDBLite consensus disorder prediction 87 113 - -
Dod02g0946 282 SUPERFAMILY DNA-binding domain 141 200 IPR016177 GO:0003677
Dod02g0946 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 3 267 - -
Dod02g0946 282 Pfam AP2 domain 141 191 IPR001471 GO:0003700|GO:0006355
Dod02g0946 282 Gene3D AP2/ERF domain 140 201 IPR036955 GO:0003700|GO:0006355
Dod02g0946 282 ProSiteProfiles AP2/ERF domain profile. 141 199 IPR001471 GO:0003700|GO:0006355
Dod02g0946 282 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 267 - -
Dod02g0946 282 SMART rav1_2 141 205 IPR001471 GO:0003700|GO:0006355
Dod02g0946 282 MobiDBLite consensus disorder prediction 29 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0946 Dod-Chr2 12007803 12009365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0946 1 282 AP2-EREBP Transcription Factor Family AT5G47230 46.689 2.93e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g0946 AP2 2.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0946 K09286 - gmx:100808173 297.745