Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0945 ATGTACGGACAGAATCCCTACGAGTCCGATTTGGCCATTCTGGACTCCATTCGGCGCCACCTGCTGGGCGAGCCCGATCCGTACAAACTCGGAGCCCCGAATTCCAATTTGGGTAATGGCCTGACTTTTTGTCGGAGCTCCAGTTTCAGCAGCTTGTACCCATGCTTAAGTGACAACTGGGGCGAATTGCCACTAAAAGAAGACGATTCAGAAGACATGGTTGTCTACGGCCCCACCGTAACTGTCAAGCCGGAGCCGGATCTATTCCCGGCGGTTCCGAGCCTTCCGGAGCCAGTTTCCCCCACTGCTCCTGCGATTAAGCAAGAGGCCACCGCCGTGCCGTCGGCGGAGGCTCCGGCGAAGGGGAAGCACTACCGCGGCGTGAGGCAGCGGCCGTGGGGGAAGTTTGCGGCGGAGATCCGTGACCCGGCGAAAAAGGGGGCTAGAGTTTGGCTCGGAACCTTCGAAACCGCCGAGGATGCTGCTTTGGCTTACGACCGTGCAGCTTACAGAATGCGAGGGTCGCGGGCTCTGTTGAATTTCCCGCTTCGGGTGAATTCGGGTGAACCCGACCCGGTTAGGGTTACATCGAAGAGGTCTTCGCCGGAGCCTTCTTCGTCGTCAGAGAGTGGGTCGCCGACGAAGCGGAAGAAGAAGGTGGCTGTGGGGCCGAGGGTGCCGGTGATGAGAGCTCAAGTAGTTGAATTGAAGACGGGGCAAGTGGGGACTCAAGTGGTGCAGTGTACACGTGGCGAGCAGTTGTTGGTTAGCTGA 774 0.5879 MYGQNPYESDLAILDSIRRHLLGEPDPYKLGAPNSNLGNGLTFCRSSSFSSLYPCLSDNWGELPLKEDDSEDMVVYGPTVTVKPEPDLFPAVPSLPEPVSPTAPAIKQEATAVPSAEAPAKGKHYRGVRQRPWGKFAAEIRDPAKKGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPEPSSSSESGSPTKRKKKVAVGPRVPVMRAQVVELKTGQVGTQVVQCTRGEQLLVS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0945 257 ProSiteProfiles AP2/ERF domain profile. 124 182 IPR001471 GO:0003700|GO:0006355
Dod02g0945 257 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED 33 77 - -
Dod02g0945 257 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED 99 227 - -
Dod02g0945 257 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Dod02g0945 257 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Dod02g0945 257 PANTHER DNA-BINDING DOMAIN 99 227 IPR044808 GO:0003700|GO:0009873
Dod02g0945 257 Pfam AP2 domain 124 174 IPR001471 GO:0003700|GO:0006355
Dod02g0945 257 CDD AP2 123 182 IPR001471 GO:0003700|GO:0006355
Dod02g0945 257 PANTHER DNA-BINDING DOMAIN 33 77 IPR044808 GO:0003700|GO:0009873
Dod02g0945 257 SUPERFAMILY DNA-binding domain 124 184 IPR016177 GO:0003677
Dod02g0945 257 MobiDBLite consensus disorder prediction 186 224 - -
Dod02g0945 257 Gene3D AP2/ERF domain 123 185 IPR036955 GO:0003700|GO:0006355
Dod02g0945 257 SMART rav1_2 124 188 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0945 Dod-Chr2 11980642 11981497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0945 8 256 AP2-EREBP Transcription Factor Family AT4G17500 52.837 1.11e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g0945 AP2 2.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0945 K09286 - mnt:21406767 281.182