LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod02g0944	ATGGCTTCCCCCACCCTTTTCATCTTTTCCCTTGTCTTTCTTCAGGCTACATTGGCATTTGGAAATGTTACTAGGAATTCAACACTCTCCACAAACAACAATGATGCGTGGCTTTCACCTTCAAGTGATTTTGCATTCGGATTTCGCCAACTTAGTGGCACGAGTCTCTACATGGTGGCCATATGGTACAACAAGATACCCGAAAGGACCATTGTTTGGAGTGCAAATGCTGACAATCCAGCACCAACAGGATCACAGGTTCAGCTCACATCATCAGGGCTCATGCTAAAGACTCCAAAAGAGGAAGAATCCATGTTGATATTACAACCAAAAAACACTGTTTCCTATGGTGCTATGCTTGACACTGGCAACTTTGTTCTTGTAAGCAGCAACTCTACTTTTGTTTGGGAGAGTTTCAAGAACCCCACAGACACGTTGCTGCCAAACCAAACACTAGATGGCACACTCACTTCACGGTTGACAGATACCAACTACACAAAAGGAAGGTTTCAACTTTATTTTGAGAATGATAGTGTCTTGCTAAGCCCCCTAGCATGGCCTACTCAGTTCCGTTATGATAACTACTATCTTCCAGGTGGTACTTTTGAATCTGCTACAAGGTTGGTGTTTGATGAATCGGGGGAGATATATCTAGAGCAGGTGAATGGGACCAGAACAAAACCGAGAGGATCAGAGTGGGACAGCTTAACCCTTGATCCTAAGGCCTATTACTATAGAGCAACACTTGACTTCTATGGAGTTTTCACACAGTACTCTCATTCAAGGGACTCCAATGACCAGCAAGGCTGGACAATCATGAGGTATGTTCCTGGCAACATTTGTACTGCAATATTTGATGATTATGGAAGTGGTTCTTGTGGGTATAATAGCTACTGCTCCATGGAAAACCAGAGGCCTACTTGCAAATGCCCTGATGGGTATTTTCTCGTGGATCCAAGTAATGAGTTTGGTGGATGCCAACCCAAATTCACCATTGGTTGTGGAGCAGATAATGATCAAGCACGCCCAGAAGAGATATATAATTTTACTATTTTGAAAGATGTGGATTGGCCTCTATCAGATTATGAACAGATGCAGCCTTTCTCTCAACAGGAATGCCAACAATCTTGCTTACAGGATTGCATGTGTGCTGTTGCCATTTTTAGCAGCAATCAAACCTGTTGGAAGAAGAGGTTGCCTCTTTCTAATGGAAGATCAGGCAGTGGAGGTCAAGTGGTCCTTATCAAAACAAGGGCTGCCCCTATTAGTACCCGTGGTCCTCCCTCTGGTTCAAAGAACGATGATCGAGTTAAGCCAATTCTTGTTGGCTTACTTATTGGATCCCTTGTTATTAACAGCATTTTCCTGGCTGCAGTTATTTTGGTTAGTCACTTGAAGAAGCCAAAAAGGATTGTCCAAGTTTCAAGTCTTTTGGGGACAAATCTGCATTCATTTACTTATGAAGCATTGAAGGAAGCCACAAGGGGTTTTAGTGAAGAACTAGGAAGGGGTTCCTTTGGCATTGTTTACAAAGGAACACTGGAATCAAGGTCTTATAATGCTGTTGCGGTCAAGAAGTTGGACAGGTTGGCAGAAGATCGAGAGAAGGAATTCAAGGCTGAGTTGAGTGCCATTGGTAAAACCTGCCACAAGAATCTTGTGAGGTTGATTGGATTCTGTGATGAGGGAACCAATAGAATGCTGGTGTACGAGTTCATGAGCAATGGCTCTCTAGCAGACACCCTATTTGGACAGACCAAACCCATTTGGGATCAAAGGGTGAGATTTGCTTTGGGGATAGCAAGAGGGTTGGTGTACTTGCACGGAGAGAGTGACACTCCCATCATTCATTGTGACATAAAGCCTCAGAATATACTCATAGACGAGCACTACACTGCAAAGATATCTGACTTTGGGTTGGCCAAGTTGTTGTTGTCTGATCAAAGCAGGACCAATACTATGATCCGAGGAACTCGAGGATACGTGGCTCCTGAATGGTTCAGGAATGTTCCTGTGACAGTTAAGGTTGATGTTTACAGCATTGGTGTGATGTTGCTGGAGATCATTTGCTGCAGAAGGAGTGTGCTGGTGATGGAGTCAGGGGAGGAAGAGAAGGGTGTGCTGACTGATTGGGCTTATGATTGCTATGTGGAGAGGAGAATAGATGCTCTGGTGGATGATGATAAGGAGGCGATGGCTGACATTGGCAGGTTACAAACTTGGGTAAAGATAGCAATTTGGTGCATTCAAGAGCATCATGAAGTGAGGCCAGCTATGGGGATGGTCATGCTAATGCTAGAAGGCCTGGTTGAAGTCCCTAATCCACCATCACCTTTTTCTCTAAATTCGATTTCTTGA	2358	0.4402	MASPTLFIFSLVFLQATLAFGNVTRNSTLSTNNNDAWLSPSSDFAFGFRQLSGTSLYMVAIWYNKIPERTIVWSANADNPAPTGSQVQLTSSGLMLKTPKEEESMLILQPKNTVSYGAMLDTGNFVLVSSNSTFVWESFKNPTDTLLPNQTLDGTLTSRLTDTNYTKGRFQLYFENDSVLLSPLAWPTQFRYDNYYLPGGTFESATRLVFDESGEIYLEQVNGTRTKPRGSEWDSLTLDPKAYYYRATLDFYGVFTQYSHSRDSNDQQGWTIMRYVPGNICTAIFDDYGSGSCGYNSYCSMENQRPTCKCPDGYFLVDPSNEFGGCQPKFTIGCGADNDQARPEEIYNFTILKDVDWPLSDYEQMQPFSQQECQQSCLQDCMCAVAIFSSNQTCWKKRLPLSNGRSGSGGQVVLIKTRAAPISTRGPPSGSKNDDRVKPILVGLLIGSLVINSIFLAAVILVSHLKKPKRIVQVSSLLGTNLHSFTYEALKEATRGFSEELGRGSFGIVYKGTLESRSYNAVAVKKLDRLAEDREKEFKAELSAIGKTCHKNLVRLIGFCDEGTNRMLVYEFMSNGSLADTLFGQTKPIWDQRVRFALGIARGLVYLHGESDTPIIHCDIKPQNILIDEHYTAKISDFGLAKLLLSDQSRTNTMIRGTRGYVAPEWFRNVPVTVKVDVYSIGVMLLEIICCRRSVLVMESGEEEKGVLTDWAYDCYVERRIDALVDDDKEAMADIGRLQTWVKIAIWCIQEHHEVRPAMGMVMLMLEGLVEVPNPPSPFSLNSIS*	786

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod02g0944	785	Pfam	Protein kinase domain	498	694	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod02g0944	785	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	11	783	-	-
	Dod02g0944	785	Gene3D	-	22	141	IPR036426	-
	Dod02g0944	785	Pfam	PAN-like domain	348	394	IPR003609	-
	Dod02g0944	785	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	11	783	-	-
	Dod02g0944	785	CDD	STKc_IRAK	501	769	-	-
	Dod02g0944	785	ProSiteProfiles	Protein kinase domain profile.	495	770	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod02g0944	785	PIRSF	SRK	1	785	IPR024171	GO:0004674
	Dod02g0944	785	SUPERFAMILY	alpha-D-mannose-specific plant lectins	57	181	IPR036426	-
	Dod02g0944	785	SMART	blect_4	28	142	IPR001480	-
	Dod02g0944	785	Pfam	D-mannose binding lectin	70	155	IPR001480	-
	Dod02g0944	785	ProSitePatterns	Protein kinases ATP-binding region signature.	501	526	IPR017441	GO:0005524
	Dod02g0944	785	Gene3D	Transferase(Phosphotransferase) domain 1	573	774	-	-
	Dod02g0944	785	SUPERFAMILY	Protein kinase-like (PK-like)	478	767	IPR011009	-
	Dod02g0944	785	Gene3D	Phosphorylase Kinase; domain 1	459	572	-	-
	Dod02g0944	785	ProSiteProfiles	Bulb-type lectin domain profile.	22	140	IPR001480	-
	Dod02g0944	785	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	615	627	IPR008271	GO:0004672\|GO:0006468
	Dod02g0944	785	SMART	serkin_6	495	732	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod02g0944	Dod-Chr2	11966059	11968690	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod02g0944	421	777	Receptor kinase-like Gene Family	AT1G56120	40.000	1.77e-63	227

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Dod02g0944		Pkinase	3.4e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod02g0944	-		-	gmx:100775269	1066.6